Gene Dred_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2709 
Symbol 
ID4956408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2936312 
End bp2937022 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content50% 
IMG OID640181889 
Productprecorrin-3B C17-methyltransferase 
Protein accessionYP_001114038 
Protein GI134300542 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1010] Precorrin-3B methylase 
TIGRFAM ID[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.424335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGTGG GACTAGGACC CGGCAACCGT GAAACCTTTA CGGAGGAAGC TCTGGGGGCT 
ATCCAGTCTG CCCAGGTTGT GGTGGGGTAT CATACTTATT TAGATTTAAT ACCAGATTTA
ATTGAGAAAA AAGAAAGGGT GGCTACCCCC ATGCGGGGTG AGGTTGCCAG GGCACGGCAA
GCTGTGGAAT TGGCCTTGGA AGGAAAAGCA GTGGCTGTTG TCAGCAGCGG TGATCCAGGT
ATTTATGGCA TGGCTGGACT GATCCTGGAG GTTGCCGAGG GGCAGGTTCC GGTGAAGATC
ATTCCGGGTA TTACCGCTGT ATCAGCGGCT GCGGCTAGCC TGGGAGCCCC TCTAATGAAT
GACTTTGCTG TTATTAGTCT GAGTGATTTA TTAACCCCCA CTGAAATTAT GTTTAAACGG
GTGGAGGCAG CAGCAGCAGG GGATTTTATA ATTGCTTTGT ACAATCCCCG CAGCCACGGT
CGCCCGGATA ATATAAAAAT TGCCAGAGAG CTTATGCTAA GGCACAAGGC ACCCTATACA
CCTGTAGGTA TTGTACGTAT GGCCCGACGG GGGGAAGAGC AAAGAACTAT AACTACCCTG
CAGGAAATGT TGAATCATGA AATTGATATG CTAACCACCG TCATTATAGG TAATTCCCAG
ACTAGGGTGG TAGGGGGCCT CATGGTAACT CCCAGGGGGT ATCATTTGTG A
 
Protein sequence
MVVGLGPGNR ETFTEEALGA IQSAQVVVGY HTYLDLIPDL IEKKERVATP MRGEVARARQ 
AVELALEGKA VAVVSSGDPG IYGMAGLILE VAEGQVPVKI IPGITAVSAA AASLGAPLMN
DFAVISLSDL LTPTEIMFKR VEAAAAGDFI IALYNPRSHG RPDNIKIARE LMLRHKAPYT
PVGIVRMARR GEEQRTITTL QEMLNHEIDM LTTVIIGNSQ TRVVGGLMVT PRGYHL