Gene Dred_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2701 
Symbol 
ID4956397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2929332 
End bp2930414 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content47% 
IMG OID640181881 
Productputative L-threonine-O-3-phosphate decarboxylase 
Protein accessionYP_001114030 
Protein GI134300534 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC ATGGTGGAAA CATCTGGCTG GCAGCAGAGA CCTATGGACT AAAAGAGGAA 
GCATTACTGG ATTTTAGTGC CAATATTAAC CCCCTGGGGC CATCGCCTCT GGCTCTGCAG
GCTATGCAAC AAGCACTGGT TCAGATTAAG CATTACCCGG AACCCCAGGC AGAAACTTTG
CGTAAGGAAA TATCCTTGGC ATCCGGCCTA TCAGAGGAAA TGCTGATTCT GGGGAATGGT
GCAGCAGAAC TCATCTATGC CCTGGGCAGG ATAATAAAAC CTCGCAGGGT TTTATTACCA
GCCCCTACCT TTAGTGAGTA TGCCGATGCC TTTGGGGAAA TTGAACAAGT TTACATTCCT
TTGGACAGGA ACAACTGTTT TACTCTGGAC ATCGAAGCAG TGGGCCAGCA GCTAAAACCG
GGTGATTTAG CAATCGTTTG TAATCCCAAT AACCCCACCG GACAACTGGT ATCAAGACAA
CACCTAAAGA GTTTAGCGGC ACGGGTTCAA GCCATCGGGG CTGATCTTTT GGTAGATGAA
GCCTTTATGG ATTTTGTCTC ACCGGAACAA TCTCTATTGC AAGAGATCCC TTATAATAGC
CACTTGTATG TTTTACGTTC CTTAACCAAG TTTTTTGCCA TACCAGGGCT GCGTTTGGGT
TACTTGGCCA CATCGCCGGA CGTCATTGAA ACTTTAATAT CTGTCCTACC ACCCTGGCGG
GTGAATCTAA TGGCTCAGGC GGCTGGAGTT GCCTCCTTGC GGGATAAGCA ATATGGTGCC
CGCACGTTGG AACAGATGAA TCGCTTAAGA CCCCTGTTGG CAGAAAGTCT GGCCTCCATC
CCAGGCCTTA GACCTCTGTC TCCCACAGCA AATTTTATCC TGGTGGACTG CCGGGAAAGC
GGCTATTCAG CGAAGGAAAT ACAAAATTTC CTGGGGCCCA AGGGAATCTT GATACGTCAA
TGTGAAAATT TTGTTGGTTT GGATGGTTAT TTTTTTAGGG TGGCGGTACG GTCAGAAGAA
GACAATGAAA GGTTATTACA AGCTTTACGT GAATTACTGC AAAAAAATAA AAGAATCCTT
TAG
 
Protein sequence
MQKHGGNIWL AAETYGLKEE ALLDFSANIN PLGPSPLALQ AMQQALVQIK HYPEPQAETL 
RKEISLASGL SEEMLILGNG AAELIYALGR IIKPRRVLLP APTFSEYADA FGEIEQVYIP
LDRNNCFTLD IEAVGQQLKP GDLAIVCNPN NPTGQLVSRQ HLKSLAARVQ AIGADLLVDE
AFMDFVSPEQ SLLQEIPYNS HLYVLRSLTK FFAIPGLRLG YLATSPDVIE TLISVLPPWR
VNLMAQAAGV ASLRDKQYGA RTLEQMNRLR PLLAESLASI PGLRPLSPTA NFILVDCRES
GYSAKEIQNF LGPKGILIRQ CENFVGLDGY FFRVAVRSEE DNERLLQALR ELLQKNKRIL