Gene Dred_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2564 
SymbolcbiO 
ID4958178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2794121 
End bp2794942 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content46% 
IMG OID640181747 
Productcobalt transporter ATP-binding subunit 
Protein accessionYP_001113899 
Protein GI134300403 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000482859 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATG CAATTGAAAT AAAGGATTTG TCCTTCTACT ATAAAGATGG CACTCGGGCA 
TTGGACAAGT TATCCTTAGG CTTTGAGAAA GGAAAGAAAA TAGCTATTTT AGGACCTAAT
GGTTCGGGGA AAACCACCCT TTTATTACAT TTTAATGGGA TTAACACTGT GCAGCAGGGT
TCTGTAACCG TTATGGGTAG GGCGGTGCAT CAAAGTAACC AGCAGTGGTT AAGAGGGAAG
GTTGGGCTGG TCTTTCAGGA CCCGGATGAT CAAATCTTTT CAGGGACTGT TTGGGATGAT
GTGGCCTTTG GCCCCATCAA TCAGGGGTTA CGGGGAGAGG AATTAAACAA CCGAGTTAAC
GAAGCCTTAC GTATTGTAAG AATGAAGGAC TTAGCCCATA AAGCACCCTA CCACCTGAGT
TATGGGCAGA AAAAAAAAGT AGCCATTGCC GGTGTACTGG CAATGGACCC CGATATGATT
GTGTTGGACG AGCCTGTGGC CTTTTTGGAC CCATCAGGAA AACGAAGCCT ATTTTCTATC
CTTGATGTAT TAAACCAGCA AGGAAAAACC ATTATACTGG CTACCCATGA CGTGGACCTA
GTAGTGCAGT GGGCAGACCA AGTGGTTATT CTTACAGAGG GCAGGGTAAT TGCCCAGGGA
GCGCCCAGGC TGCTCTCAGA CCCGGCGCTC GTTGAGGAGG CAGATTTAGA ATTACCCACA
GCCAGTCAAA TCTTCTTACC CTATCAGGAA CTGTATCAGC AGAAGATACC TGTCACGGTG
GAAGACGCCC AGGCGATGAT CAAACAGCTT TTAACTAGAT AA
 
Protein sequence
MDYAIEIKDL SFYYKDGTRA LDKLSLGFEK GKKIAILGPN GSGKTTLLLH FNGINTVQQG 
SVTVMGRAVH QSNQQWLRGK VGLVFQDPDD QIFSGTVWDD VAFGPINQGL RGEELNNRVN
EALRIVRMKD LAHKAPYHLS YGQKKKVAIA GVLAMDPDMI VLDEPVAFLD PSGKRSLFSI
LDVLNQQGKT IILATHDVDL VVQWADQVVI LTEGRVIAQG APRLLSDPAL VEEADLELPT
ASQIFLPYQE LYQQKIPVTV EDAQAMIKQL LTR