Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2554 |
Symbol | valS |
ID | 4957838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2777500 |
End bp | 2780139 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640181733 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001113889 |
Protein GI | 134300393 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0681361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAGAGA ACAATATTCC AACCGTTTAC AATCCCAAGG AGGTAGAAAG TAAGTGGTAC CGTCACTGGG AAGAAAGTAA ATATTTCTAT GCAAAAGTAG AGAAGGATAA AACCCCTTTT TGTATTGTTA TGCCGCCCCC AAACGTTACT GGCCAACTCC ACATGGGGCA TGCCCTGGAC AATACCCTCC AGGATATCTT AACCCGTTGG CGTCGTATGC AGGGGTATAA CGCATTGTGG ATTCCCGGTA CTGACCACGC AGGAATTGCT ACCCAGGCCA AGGTAGAGGA ACAACTGGCT AAAGAATGCC AGTCCAAATA CGATCTAGGC CGGGAGAAAT TCCTGGAGCG GGTCTGGGCT TGGAAGGAAC AGTATGGTAA CCGCATCACC ACACAGCTAC GTCATCTGGG CGCTTCCTGT GATTGGGATC GTGAACGCTT TACAATGGAT GAAGGCTGCT CCAAAGCTGT TTTGGAAGTA TTTGTAAAAC TATTTGAACA AGGCCTGATT TATCGGGACT ACTATATTAC CAACTGGTGC CCTCACTGTC AGACCACCAT TTCTGATATT GAAGTGGAGC ATCAGGATAA GCCGGGTCAA CTGTACTACA TTAAGTACCC TGCCAAGGAG ACCCCGGAAG AATATATTAT TATTGCCACC ACCCGCCCGG AAACCATGTT GGGTGATGTT GCCGTTGCTG TTAACCCGGA GGATGATCGT TACCTGCATT TAGTTGGCAA AAGCCTGGTT CTGCCCATTG TAGGTCGTGA ATTGCCGGTT ATTGCAGATG CTTACTGCGA TCCCACCTTT GGCACCGGTG CGGTGAAGAT GACCCCAGCC CACGATCCCA ATGACTTTGA AATTGGCCGT CGTCATGGGT TACCTGAGGT CATTGTTATT GACAAGTATG GCAAAATGAA CGAGCATGCC GGAAAGTACC AAGGCCTGGA CCGTTTTGAG TGCCGTAAAC AGATTGTTCG TGACTTGGAA GCTATGGGAT ATCTAGTTAA GGTAGAAGAT ATTAGCCATG CGGTGGGTCA TTGCTATCGC TGCAATACCG CCATTGAGCC GGCACTTTCC AAACAATGGT TTGTTAAGAT GAAACCCTTG GCAGAGCCAG CCATCCAAGC AGCCAAAGAC GGGCGCATTA AATTTATCCC TGAGCGCTTT ACAAAGATTT ACCTAAACTG GATGGAAAAC ATACGTGACT GGTGTATTTC CCGCCAGCTA TGGTGGGGTC ACCGTATTCC GGTATACTAC TGCCAGGACT GTGAAGAAAT GGTTGCTTCC ATAACCCCAA TAACAAAGTG CAGTAAGTGC GGAGGTAAGG TTGAGCAGGA TAACGACGTA TTGGACACCT GGTTCTCATC TGCCCTGTGG CCATTTTCCA CCTTAGGTTG GCCGGAAAAA ACCGAAGAGT TGGAGCATTT TTATCCCACC TCGGTGCTGG TAACTGGCCG TGATATTATT TTCTTCTGGG TGGCCCGGAT GATTTTCTCG GGTCTTAGAT TTATGGAAGA AGAGCCCTTT AAAGAAGTCT TTATCCATGG ACTTGTCCTG GATTCACTGG GACGTAAGAT GAGTAAGTCT TTGGGAAATG GGGTTGATCC GCTGGATATC ATTGAGAGCC ATGGTGCTGA TTCCCTGCGC TTTATGCTGA TTACCGGTAA CACACCCGGT AATGATTTGC GCTTCCATTT TGAACGCTTG GATGGTGCAA GGAATTTTGC CAATAAATTG TGGAATGCCT CCCGCTTTGT TATGATGAAC CTAGGAGATT ATGACCCAAC CTCCCAAGGT GGCCAGTACA CCTTGGCAGA TCGCTGGATC CTCAGCCGTT TGCAAGGAAC TGCGAAGGAT GTTACAGATT TTCTGGAACG CTATGAGTTA GGGGAAGCTG CCCGTGTGCT GTATGAATTT ATTTGGAGTG AATTCTGCGA TTGGTATATT GAACTGGCGA AACCTCGTCT ATTTGGTAAA ACCACACCAG AAGACAGAGT TACAGCCCAA CATGTACTGG TGCAAGTATT AAGGCAAGTA TTGGAAATGT TACATCCCTT TATGCCCTTT ATTACTGAAG AAATTTGGCA GAAGCTGCCC CATCAGGGTG AAACTATCAT GCTGGCCCAG TGGCCTAAGG CTGATGAAAA CTTATTAGAT GATACTGCTG AAGCTGAAAT GGCTGTACTA ATTGAAGTAA TCACGGCTGT TCGCCGCATC CGGGGTGAGA TGAATGTACC GCCTAGTAGA AAGGCAGAGG CCTTGCTGGT AGCAGCAGAA GAAAGCTTCC GTGGTATTCT GGAAAGAAAT GCGGCTTATA TTCAAGGGTC GGCCAATGCC GAAGCAAAGA TACTGAGTGA GCTGCCTGTA AAACCAGATC AATCCGCCAC TGCGGTAACC AGGGGTGTAG AAATATTTGT TCCTCTTAAA GGGCTAATTG ATTTGGATAA AGAGATTGCT CGTTTAAATA AGGAATTAAA AACCATACAG GGGGACCTGG CTAGAGTGCA AGGAAAACTA AATAATCAGG GTTTCCTGGC CAAAGCACCG GCTGAAGTTA TTGAAAAGGA AAAGGCAAAA GAGCAGGAAC TTTCTGTTAA GGCGGATGCT CTGAAGGATC GTCTTTCCAT GTTAAGCTAA
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Protein sequence | MTENNIPTVY NPKEVESKWY RHWEESKYFY AKVEKDKTPF CIVMPPPNVT GQLHMGHALD NTLQDILTRW RRMQGYNALW IPGTDHAGIA TQAKVEEQLA KECQSKYDLG REKFLERVWA WKEQYGNRIT TQLRHLGASC DWDRERFTMD EGCSKAVLEV FVKLFEQGLI YRDYYITNWC PHCQTTISDI EVEHQDKPGQ LYYIKYPAKE TPEEYIIIAT TRPETMLGDV AVAVNPEDDR YLHLVGKSLV LPIVGRELPV IADAYCDPTF GTGAVKMTPA HDPNDFEIGR RHGLPEVIVI DKYGKMNEHA GKYQGLDRFE CRKQIVRDLE AMGYLVKVED ISHAVGHCYR CNTAIEPALS KQWFVKMKPL AEPAIQAAKD GRIKFIPERF TKIYLNWMEN IRDWCISRQL WWGHRIPVYY CQDCEEMVAS ITPITKCSKC GGKVEQDNDV LDTWFSSALW PFSTLGWPEK TEELEHFYPT SVLVTGRDII FFWVARMIFS GLRFMEEEPF KEVFIHGLVL DSLGRKMSKS LGNGVDPLDI IESHGADSLR FMLITGNTPG NDLRFHFERL DGARNFANKL WNASRFVMMN LGDYDPTSQG GQYTLADRWI LSRLQGTAKD VTDFLERYEL GEAARVLYEF IWSEFCDWYI ELAKPRLFGK TTPEDRVTAQ HVLVQVLRQV LEMLHPFMPF ITEEIWQKLP HQGETIMLAQ WPKADENLLD DTAEAEMAVL IEVITAVRRI RGEMNVPPSR KAEALLVAAE ESFRGILERN AAYIQGSANA EAKILSELPV KPDQSATAVT RGVEIFVPLK GLIDLDKEIA RLNKELKTIQ GDLARVQGKL NNQGFLAKAP AEVIEKEKAK EQELSVKADA LKDRLSMLS
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