Gene Dred_2538 details

Gene Information

• Locus tag: Dred_2538
• ID: 4955369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: -
• Start bp: 2761058
• End bp: 2762932
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640181717
• Product: radical SAM domain-containing protein
• Protein accession: YP_001113873
• Protein GI: 134300377
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00569062
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAC TGGATAAGAT ACTTGCCCGA GTTCAAAAGC CGTCACGCTA TGCTGGCGGT 
GAATGGAACG CAGTGAAAAA GGATTGGGAT CAGGTGGATG TAAAAATGGC CTTTGCTTTT 
CCGGATGTCT ACGAAGTAGG CATGTCCCAT CTGGGCCTAC AGATCCTTTA CCATGTGGTG 
AATAAGCGAA AGGATGCCTT GATGGAAAGG GTCTTTGCAC CTTGGACAGA TATGGAAGAA 
CAAATTCGCA AAGAAAAAGT ACTATTATTT AGCCTGGAAT CCCAGCGTCC ACTGGTGGAT 
TTCGATATTC TAGGGTTTAC TTTGCAGTAT GAAATGAGTT TCAGCAATAT CCTAAATATG 
ATGGATCTGG CTGGGCTACC GATACGTTCT AAACATCGGG ATGCCAACAT GCCCCTAGTT 
ATTGCAGGGG GACCCTGTGC CTTTAATCCT GAACCCATTG CCGATTTTAT TGACCTTTTC 
GTGATCGGAG AAGGGGAAGA AGTCATCCAT GAATTAATTG ATGTTTACAA GGAACTGAAG 
GAGAAGGGGA CTAACCGCCA GGATATGCTG TTATATTTTG CTAAACACAT TCCTGGTGTC 
TATGTACCCT CCTTATACGA TGTCAAATAC AACGACGACC AAACTGTTAA AGCAATAGTG 
CCTACTAAGG ATGGTGTCCC CGAAAAAATT GGCAAAAGAA TTATAAAGGA TTTTGATAAC 
GTGGACTTTC CCACCAACCC CATAGTACCT ACCATGGGTG TTGTTCATGA CCGGGTGATG 
GTGGAAGTCC TACGTGGTTG CACCCGGGGG TGTCGTTTTT GTCAGGCTGG TGTTTTATAC 
AGACCTGTCA GAGAGAAAAA GCCGGAAACC TTAGTCCGAC AGGTAGAAGA AATGATTGCC 
AATACTGGCC ATGATGAGAT TTCTCTTACT TCGTTAAGCA CTGCAGACTA CACGGGGGTA 
GCACCTCTGG TGAAAAATCT ACTGGATATT TATGGGGAAC GGGGGGTTAA TGTTTCCTTG 
CCTTCTCTAC GGTTAGATGC TTTCTCCATT GATCTGGCCA AAGAAGTGCA AAAAGTACGC 
AAGAGTGGGT TAACCTTTGC TCCGGAAGCC GGTACCCAGC GTTTACGAGA TGTTATTAAT 
AAAAATGTAA CAGAACAGAA TCTTGTTGAT GCGGTTACTT CCGCTTTTCA AAATGGCTGG 
TCTTCTGTTA AACTCTACTT TATGATTGGG CTGCCCACTG AAACCTATGA GGATATTGAT 
GGTATTGCAG AAATGGCTAA GAAAGTGGTG AAAATTGGCC AAGAGTGTGG CGTACCCAGG 
GGACGCTTAA AAGTAACGGT AAGTACGTCA TCCTTTGTAC CTAAATCCCA TACTTCTTTT 
CAATGGGAAC CCCAGAATAC TTTGCAGGAA CTACGCGATA AGCAAAAATA CCTAAAAGAA 
AGATTAAGGG ATAAACGGAT CTCTTATAAC TGGCATGACC CGGAGACCAG TTTCCTAGAG 
GCTGTCTTTG CAAAGGGAGA TCGTCGTTTG GGCAATGTTT TGGAAACTGC TTGGTCCAAA 
GGTGCCCGGT TTGACGGATG GTCGGAACAT TTTAACTATA CTCTTTGGAT GGAGGCCTTT 
ACCGGCGAAA AATTGGATCC AAAGTGGTAT GCATATCGAG AAATCAGTTA TGAAGAAGTG 
TTGCCCTGGG ATCACATTGA AGCAGGGGTA AGCAAAAGAT TTTTAATGAG AGAACACAAA 
AAGGCAATGG GGAGTGAACC CACCATGGAC TGCCGAAATG GTAAGTGCAC CGGCTGTGGT 
CTTTGCCCAA CCCTTGAAAT TAGACCAATG ATTTTGGGAG GTGTGGATAT TGCCCCGATA 
CAGGGTGAAG TATAG 

 

Protein sequence

MNKLDKILAR VQKPSRYAGG EWNAVKKDWD QVDVKMAFAF PDVYEVGMSH LGLQILYHVV 
NKRKDALMER VFAPWTDMEE QIRKEKVLLF SLESQRPLVD FDILGFTLQY EMSFSNILNM 
MDLAGLPIRS KHRDANMPLV IAGGPCAFNP EPIADFIDLF VIGEGEEVIH ELIDVYKELK 
EKGTNRQDML LYFAKHIPGV YVPSLYDVKY NDDQTVKAIV PTKDGVPEKI GKRIIKDFDN 
VDFPTNPIVP TMGVVHDRVM VEVLRGCTRG CRFCQAGVLY RPVREKKPET LVRQVEEMIA 
NTGHDEISLT SLSTADYTGV APLVKNLLDI YGERGVNVSL PSLRLDAFSI DLAKEVQKVR 
KSGLTFAPEA GTQRLRDVIN KNVTEQNLVD AVTSAFQNGW SSVKLYFMIG LPTETYEDID 
GIAEMAKKVV KIGQECGVPR GRLKVTVSTS SFVPKSHTSF QWEPQNTLQE LRDKQKYLKE 
RLRDKRISYN WHDPETSFLE AVFAKGDRRL GNVLETAWSK GARFDGWSEH FNYTLWMEAF 
TGEKLDPKWY AYREISYEEV LPWDHIEAGV SKRFLMREHK KAMGSEPTMD CRNGKCTGCG 
LCPTLEIRPM ILGGVDIAPI QGEV