Gene Dred_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2517 
Symbol 
ID4956087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2738169 
End bp2738750 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content44% 
IMG OID640181693 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001113852 
Protein GI134300356 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000757991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAATA TAAGTTTTTT AAAAGAACAG CTAAGTCTAA TCATGCCTGA ACAACGTTTT 
CGGCACTCCT TGGGTGTGGC AGAGACTGCA GAAAAACTGG CTCGCAAGTA CGGTGCAGAT
CCTTTAAAGG CTGGGCTTGC CGGGTTACTG CACGATATTG CCAGGGATTT TGATGATAAT
GAAATGCTGC AGCGGGCGAA AAAGGCAAAC TTAGCAGTCA GTGAGTTTGG TTTTGCCATG
CCTTTATTGT TGCATGGTCC GGTGGCTGCT GTGATGGCCA GAGATGAGTA TGGCATTACC
GACCCGGAGA TTTTAAATGC CATCGCCCTT CATACGGTGG GTTCAGAATA CATGAATCAA
CTGGATAAAA TAATATTTGT AGCAGATAAA ATAGAACCAA ACCGACGACA TTCCGGCGTC
GATGAGATAA GACGCCAGGC GGCGCAAGAT CTGGATACCG CTCTGTTAAG CTGTTTTGAT
GAAAGTATCC GCTATGCCTT AAAGATTGGT TGTTTGCTTC ATCCCACCAG TGTAAAAGCA
AGAAATGCAA TTTTAGTTGC AAGGGGTTTC TTTAGAAAAT AG
 
Protein sequence
MVNISFLKEQ LSLIMPEQRF RHSLGVAETA EKLARKYGAD PLKAGLAGLL HDIARDFDDN 
EMLQRAKKAN LAVSEFGFAM PLLLHGPVAA VMARDEYGIT DPEILNAIAL HTVGSEYMNQ
LDKIIFVADK IEPNRRHSGV DEIRRQAAQD LDTALLSCFD ESIRYALKIG CLLHPTSVKA
RNAILVARGF FRK