| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2462 |
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| Symbol | |
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| ID | 4956629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2679938 |
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| End bp | 2681041 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640181638 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001113797 |
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| Protein GI | 134300301 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0127291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGACG AAGCGAAAGT AGAACAAATT AAAGAGTTAA TCGAAAAAGG CAAAAAACGT
GGGGTACTAA CATATAACGA AATTATGGAT ACCCTGCAGG GCACCGAGTT GTCGCCAGAT
CAAATTGACG ACATTTATGA AAAGATTTCT GCTATGGGTA TTGAAGTTGT CCCCTTAGCC
AGTGATTTGG AGCCTCTGGA AGTAGATGAC TCAGTAGAAA ATTCAACCGA GGAAGAGGTT
GAGGTTGAAG TTGATTTAAG TATTCCCGAG GGTATTGGTA TCGATGACCC CGTTAGAATG
TACCTAAAGG AAATTGGCCG GGTTCCCCTA CTATCGCCCG AAGAAGAAGT AGACTTGGCT
AAAAGGATGG AGCAAGGAGA AGAAGAAGCT AAACGACGTC TTGCGGAGGC TAATTTACGA
CTGGTTGTTA GTATTGCCAA GCGCTACGTG GGCAGGGGTA TGCTTTTCTT GGATTTAATC
CAGGAAGGAA ATTTAGGTCT TATTAAAGCG GTAGAAAAAT TTGATTATCG AAAAGGTTAT
AAATTCAGTA CCTATGCCAC CTGGTGGATT CGGCAGGCCA TTACCCGGGC CATTGCAGAT
CAGGCCCGTA CCATCCGTAT CCCTGTACAT ATGGTGGAAA CCATAAATAA ATTGATTCGG
GTTTCTCGCC AACTGCTACA GGAACTGGGA AGGGAACCCT CCCCTGAAGA AATTGCCAAA
GAGATGGATA TTTCTGGTGA AAAAGTTCGA GAAATCTTGA AAATTGCTCA GGAGCCTGTA
TCACTGGAAA CGCCCATTGG TGAAGAAGAA GATTCACACC TGGGTGATTT TATTGAAGAT
GCAGATGCCA GGGCACCAGC AGAAGAAGCT TCCTTTACAC TTTTGCGCGA ACAATTAGAT
GAAGTTCTTA AAACCTTAAC GGATCGTGAG CAAAAGGTTC TTCGCCTGCG TTTTGGTTTG
GACGATGGTC GTGCTAGAAC ATTGGAAGAA GTGGGACAAA AATTTGGCGT TACTAGAGAA
CGTATTCGTC AAATTGAAGC AAAGACGTTA CGGAAACTGC GACATCCAAG CCGTAGTAAG
AAATTAAAGG ATTACCTGGA TTAA
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| Protein sequence | MRDEAKVEQI KELIEKGKKR GVLTYNEIMD TLQGTELSPD QIDDIYEKIS AMGIEVVPLA
SDLEPLEVDD SVENSTEEEV EVEVDLSIPE GIGIDDPVRM YLKEIGRVPL LSPEEEVDLA
KRMEQGEEEA KRRLAEANLR LVVSIAKRYV GRGMLFLDLI QEGNLGLIKA VEKFDYRKGY
KFSTYATWWI RQAITRAIAD QARTIRIPVH MVETINKLIR VSRQLLQELG REPSPEEIAK
EMDISGEKVR EILKIAQEPV SLETPIGEEE DSHLGDFIED ADARAPAEEA SFTLLREQLD
EVLKTLTDRE QKVLRLRFGL DDGRARTLEE VGQKFGVTRE RIRQIEAKTL RKLRHPSRSK
KLKDYLD
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