Gene Dred_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2456 
Symbol 
ID4956213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2672090 
End bp2672569 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content46% 
IMG OID640181628 
Productribonuclease H 
Protein accessionYP_001113791 
Protein GI134300295 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000408734 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAA ATCAAAATAC AAACCTAAAA GAAATCACCA TGTACACCGA TGGAGCCTGT 
TCCGGCAATC CCGGTCCAGG TGGCTATGGT GTTGTTATGC TATATAAAGG ACACCGCAAG
GAACTGTCTG CAGGGTTTCG GGATACCACC AACAACCGGA TGGAGTTATT GGCTACCATT
GTAGGCCTGG AAACACTGAA AGAAAAGTGC AATGTTAATC TCTATACAGA CTCCCAGTAT
GTCGTCAATG CCATTGAAAA GGGTTGGGCT AAGAAGTGGC GGGCCAACGG TTGGATGCGT
AATAAGAAGG AACCTGCTCT CAATCCAGAT TTGTGGGAAC GATTATTAAA ACTCTGTGAA
TTTCACAATG TTAAATTCAA CTGGGTTAAG GGGCATGCTG GCCATCCGGA AAATGAACGT
TGTGACCAAC TGGCGGTGGC AGCTGCCAAG CAGCCTAATC TACCCCTGGA TGTACGATAA
 
Protein sequence
MNTNQNTNLK EITMYTDGAC SGNPGPGGYG VVMLYKGHRK ELSAGFRDTT NNRMELLATI 
VGLETLKEKC NVNLYTDSQY VVNAIEKGWA KKWRANGWMR NKKEPALNPD LWERLLKLCE
FHNVKFNWVK GHAGHPENER CDQLAVAAAK QPNLPLDVR