| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2452 |
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| Symbol | |
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| ID | 4955992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2666962 |
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| End bp | 2667852 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640181624 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001113787 |
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| Protein GI | 134300291 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0368392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGCAAG CTCAAACATC TGCGCCGGTT CCTCAACCGG CCGAGCAGAC TTACTCACCG
TTGGCAGACT TCTGGCACCG CCTGCGGAAA AACAAGCTGG CGATGGTCAG TCTAATCTTT
TTATTAACCT TAACCTTTGT TGCTATTTTT GCACCCTTTG TTGCACCCTA CGACCCTTAT
CTCAGTGAAA TGCCCAAGGC ACTGCACGGC CCCAGTGCGC AGCATTGGCT GGGCAACGAT
GAATTGGGCC GAGACATCCT AAGCCGGATT ATTTACGGGG CAGGCGTATC CCTGCGGGTG
GGTTTGATTG CTGTGTGCAT TGCCCTATCG GTAGGCATGG TGGTTGGTTC TGCGGCCGGT
TATTACGGTG GTCGTTTGGA TAACATTATT ATGCGTTTTA TGGATATTAT GCTGGCCTTC
CCCTCTATTT TGCTGGCCAT AGCCCTAATG GCTGTTTTGG GTCGGGGGGT AGAAAATGCC
ATTATTGCCA TTGGTATTGT GTCTATTCCT GAATATGCTC GAATTATTCG GGGGTCCGTA
TTGTCCGTTA AAGAAAATGA GTATGTACAG GCTGCCCGAG CCATTGGGAA CAATGACTTT
CAAATTATTT TCAAACATAT CATGCCTAAC GTTATGGCCC CAGTAATTGT GCGTGCCACC
CTTGGTATCT CCACCGCTAT CCTGGAGACA TCTGCTCTGG GGTTCCTAGG TCTGGGGGTT
GCACCGCCCT TCGCAGAATG GGGAACCATG TTGGGAAGTG GTCGAGGATA TATGTATAAT
GCGCCGCATC TGGTGTTTTT CCCGGGTATT GCAATTACCC TGACGGTTAT GGCCTTTAAC
CTGCTGGGGG ATGGCCTGCG GGATGCACTG GATCCACGGT TGCGCCGCTA G
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| Protein sequence | MPQAQTSAPV PQPAEQTYSP LADFWHRLRK NKLAMVSLIF LLTLTFVAIF APFVAPYDPY
LSEMPKALHG PSAQHWLGND ELGRDILSRI IYGAGVSLRV GLIAVCIALS VGMVVGSAAG
YYGGRLDNII MRFMDIMLAF PSILLAIALM AVLGRGVENA IIAIGIVSIP EYARIIRGSV
LSVKENEYVQ AARAIGNNDF QIIFKHIMPN VMAPVIVRAT LGISTAILET SALGFLGLGV
APPFAEWGTM LGSGRGYMYN APHLVFFPGI AITLTVMAFN LLGDGLRDAL DPRLRR
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