Gene Dred_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2409 
Symbol 
ID4957827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2630396 
End bp2630686 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content40% 
IMG OID640181581 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001113744 
Protein GI134300248 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TGCCTGTGGC CACACCGCTA CAAGTTTCTG AGACAACTTC TGCCAATAAA 
TACGCAGGCC CAGCGGATTT TGGTGGGGTG TTAAATAAAG CCATTTCAAA ATTAAACGAC
ACACAAATAC AAGCCGATGA TGTTATGCAA AAATTTCTGG TGGGAGAGGT ACAAGATATC
CATCAGGTAA CCGTTGCTAT GCAGGAAGCA AAACTGACCA TGCAACTGGC GGTGGAAGTA
AGAAATAAAA TTGTTGAAGC TTATCAAGAA ATATCCAGGA TACAATTGTA A
 
Protein sequence
MNILPVATPL QVSETTSANK YAGPADFGGV LNKAISKLND TQIQADDVMQ KFLVGEVQDI 
HQVTVAMQEA KLTMQLAVEV RNKIVEAYQE ISRIQL