| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2394 |
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| Symbol | fliR |
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| ID | 4957222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2616841 |
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| End bp | 2617608 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640181566 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001113729 |
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| Protein GI | 134300233 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTAATC TAGTTTATGT AACCACCTTC TTTTTGGTAT TTGTTAGAAT GTTATCCTTT
ATTTTTTCTT GTCCACTGTA TGCCATACCG GGCATTCCGC CCTTGGTTAA GGCGGGGCTA
TCCTTAGTTT TGGCTGCTCT GACAGCCCCT CTGGTAGAAC CAGCTGCAGC CAGCTTTCCC
GGTGGTTTAT GGGGATTGGG TCTGGCGGTT TTTAGTGAAG TGGGAGTGGG ACTTGCCATA
GGCTTGGTCT GTACCTTTGT TTTTAATGCC ATTCGGATTG CCGGCCAATT GCTGGATTTT
CAAATTGGAT TTGCCATGGC CGCTGTCATG GACCCTTTGG GTGGCGGCAT GAACACCCTG
GTTTCCCGGT TCCTTTTCTT TATGACGCTG GTCTTATATA TGAATATGGA TGGTCATCAT
GCTTTGATTC GTGCTCTGGT AAAAAGTTAT GAGCTTGTTC CCTTGACTGC TGCGGCTATG
AATGGTGAAC TAACCCTATT AATCATTCGA ATTTTTACCG ATACCTTTGC CTTGGCAGTT
CAGATTTGTG CCCCGGTTGT AGCAGTACTG GTGATTACCG ACTTGGCCAT GGGGCTAATA
GGTAAAACAG CACCTCAGCT CAATATATTT CAACTTGGTT TTCCTTTGAA AATTGCGGTG
GGGGTTTCCA CATTGGCAAT ATTATTACCA GCCCTAACCT CCGTCTTTAA ATACTTATTT
GATACCCTGC ATAAGGATCT ATTACTCTTG CTGAAGGGGT TGGCCTGA
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| Protein sequence | MINLVYVTTF FLVFVRMLSF IFSCPLYAIP GIPPLVKAGL SLVLAALTAP LVEPAAASFP
GGLWGLGLAV FSEVGVGLAI GLVCTFVFNA IRIAGQLLDF QIGFAMAAVM DPLGGGMNTL
VSRFLFFMTL VLYMNMDGHH ALIRALVKSY ELVPLTAAAM NGELTLLIIR IFTDTFALAV
QICAPVVAVL VITDLAMGLI GKTAPQLNIF QLGFPLKIAV GVSTLAILLP ALTSVFKYLF
DTLHKDLLLL LKGLA
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