| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2389 |
|---|
| Symbol | |
|---|
| ID | 4957047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2610965 |
|---|
| End bp | 2611630 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640181561 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_001113724 |
|---|
| Protein GI | 134300228 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5581] Predicted glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAATTG AAAGAATTAA AGTGGGACAA AAGGTTACTA TTTTTCCAAT GGACACAGAA
GAACAGTATT TGAGTTCTGT TTATGATATG GATAACAAAG GGATATATGT ACCCATTCCA
TATGCGGAGA AGCATCCGTT AATTTTAGCC CATGGACAGC AAATTCGTGT AAAGTACATG
GGGGAAGGCA GTGCCTATCT GTTTGTTACC GAAGCCATTG GCAGAAGGAT AGAACAGGAC
AAGTTACCCA TGTATATCTT GAAACACCCA AAGGAGTCAG AGATTACCAG AGTGCAGCTC
AGGGAATTTG CCCGGGTGCC GGTGATGTTG GACATTGAGT ATGCAGAAGC AGTGGCCGAC
AACGAGTCAC CAAGCTTCAA AAAGGTGTGT ATTGTAGATC TCAGTGGCGG AGGCTTAAAG
TTTGCTTTAA AGGAGCCTAT TAATCGGGGC ACAAACATCA TGGTACGCTT TACACTGGCT
GTAAAGGCAA AGAAGAAGAC CCAAGAGTTT AAGTTATTAG CCAGAGTCAT GCGATGCCAA
TTGGTTGACG AAGAAGCAAA GGTATATCAT GTTGGCGTAA GGTTTACCGA TATTCGACCC
CAGCAGCAAG ATATGATTAT GGCCTTTGTG TTTGAACGGA TGATTCAAAT AAAACGCAGG
CAGTAA
|
|---|
| Protein sequence | MAIERIKVGQ KVTIFPMDTE EQYLSSVYDM DNKGIYVPIP YAEKHPLILA HGQQIRVKYM
GEGSAYLFVT EAIGRRIEQD KLPMYILKHP KESEITRVQL REFARVPVML DIEYAEAVAD
NESPSFKKVC IVDLSGGGLK FALKEPINRG TNIMVRFTLA VKAKKKTQEF KLLARVMRCQ
LVDEEAKVYH VGVRFTDIRP QQQDMIMAFV FERMIQIKRR Q
|
|---|
| |