| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2364 |
|---|
| Symbol | |
|---|
| ID | 4955839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2587839 |
|---|
| End bp | 2588891 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640181536 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_001113699 |
|---|
| Protein GI | 134300203 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGC AGAAATCACA ACCCCTTACC TATGCTGGGG CGGGGGTCAA TATCGAAGCA
GGAAACCAGG CTGTCAGTCT CATGAAGCAG GCAGTACGTA GCACCTTTCG ACCGGAGGTT
CTGACGGACA TTGGAGGCTT TGGGGGACTC TTTGCTCTCA ATGCCGGTAA ATATAAGGAG
CCGGTATTGG TTTCCGGTAC CGATGGCGTA GGCACCAAAT TACGTGTGGC TCAACTAACC
GACAATCATC ACACCATTGG CATTGATGCC GTGGCCATGT GTGTGAATGA TATCTTGGTT
CAGGGGGCAG AACCACTGTT TTTTCTGGAT TATCTAGCTG TGGGGAAGCT AGTGCCCGAA
AGGGTGGCCG AGATTGTAAA GGGTGTGGCC GAAGGTTGCC GCCAGGCCGG TTGTGCCTTA
ATTGGCGGGG AAACAGCAGA AATGCCGGGT TTTTATGCAG TAGAAGAATA TGACATTGCC
GGCTTTGCCG TAGGCGTTGT GGAGCGTACG CAGTTAATTG ATGGTAGAGG TATTGAAGCA
GGGGATGCTG TAATTGGTCT TCCTTCTTCA GGTCTCCATA GCAATGGTTA TTCCTTGGCC
CGGAAGGCCC TGCTGGAGGT AGCAGGTTAC GGGATGACCG ATACCGTAAA AGAGCTGGGC
CGTTCTGTTG GGGAAGAATT ACTGGAACCC ACACGTATCT ATGTCAAGGC AGTTCAACCG
CTGCTGGAAA AGTTTACTGT CAAGGGAATG GCCCATATTA CCGGCGGTGG CTTAACTGAA
AATATTCCCC GTATGTTGCC CGAAGGGGTC AAGGTGGTAC TGAACCGTTC CGCTTGGCCG
GTATTGCCCG TATGCCAGCT AATTCAACAG ATTGGCCAGG TAGCAGAAGA GGAAATGCTG
CGTACCTTTA ATATGGGAAT CGGCATGGTA TTGATTGTAC CCGCAGCAGA GTCAGCGGCG
GTGCTGCAGG ATTTAGCCAG CCGTCATGAA CAGGCCTATC TGATTGGACA GGTGGAAAGT
GGTCCTTCAC AAGTTGAATA TATACAGGGT TAA
|
|---|
| Protein sequence | MTEQKSQPLT YAGAGVNIEA GNQAVSLMKQ AVRSTFRPEV LTDIGGFGGL FALNAGKYKE
PVLVSGTDGV GTKLRVAQLT DNHHTIGIDA VAMCVNDILV QGAEPLFFLD YLAVGKLVPE
RVAEIVKGVA EGCRQAGCAL IGGETAEMPG FYAVEEYDIA GFAVGVVERT QLIDGRGIEA
GDAVIGLPSS GLHSNGYSLA RKALLEVAGY GMTDTVKELG RSVGEELLEP TRIYVKAVQP
LLEKFTVKGM AHITGGGLTE NIPRMLPEGV KVVLNRSAWP VLPVCQLIQQ IGQVAEEEML
RTFNMGIGMV LIVPAAESAA VLQDLASRHE QAYLIGQVES GPSQVEYIQG
|
|---|
| |