Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2348 |
Symbol | |
ID | 4956624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2567926 |
End bp | 2570118 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640181520 |
Product | ATP-dependent DNA helicase PcrA |
Protein accession | YP_001113683 |
Protein GI | 134300187 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0164573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TATCGCAATT GAATCCTGCC CAAGAAGAGG CGGTACAACA TACGGAAGGC CCCCTGTTGG TACTGGCAGG TGCTGGCTCC GGTAAGACCA GAGTGCTGAC ACATCGAATT GCCCAAATTC TCAGCCAAGG AGTTCGGCCC TATAACATTT TAGCCATCAC CTTTACCAAT AAGGCTGCTA ATGAAATGCG AGCAAGGGTA GAAAATTTAG TACCCCAAGC AGCCAAGGAC CTTTGGGTAA CTACCTTTCA CAGTGCCTGT CTGCGTATCC TCAGAAGAGA AATCGATGTT ATGGGCTATG GTTCTAACTT TTCCATTTAC GACGATGCTG ATCAACAAAC TGTCATCAAA GAATGCCTAA AGGAATTAGA AATTGATGAA AAAAGGTTTC AACCCCGGGC TATGCTGTCA GCGATCTCAG GAGCAAAGAA CAAGCTTCAG ACACCGGCCC AATATGATCG TCAGGCCTTT GAATATTTTG AACAGGTAGC TGCCAGGGTC TATCGCCTGT ACCAGGAAAA ACTATTTAAA AATAATGCGG TGGATTTTGA TGACCTAATC ATGTTAACAG TGCGTTTGTT TAAGGAAAAC CCAGATGTCC TAGCCTATTA CCAAAATAAA TTTAAATATA TTTTGGTGGA TGAGTACCAG GACACCAACC ATACTCAGTA TGTTTTGGTG AACATGCTGG CAGAAAGTCA TCGCAATGTT TGTGTGGTAG GTGATCCCAA CCAGTCTATT TATAAATGGC GGGGAGCCGA TATTAACAAC ATTCTGGACT TTGAACGGGA CTATCCCGAG GCAAAAGTGG TCAAACTGGA ACAAAACTAC CGTTCCACCG GTAACATTCT ACAGGCTGCC AATGCTGTTA TTAAAAACAA TGCTGAGGCT AAGGATATGA AACTCTGGAC CTCCAAAGGG GAGGGTAATC GAATTCATAT CTACCGGGCA GAGAACGAAC GCTTTGAGTC TATGTACATT GCGGACCGTG TTAAAGATTT GCGTTTCTCC CATAACCGCA AGTATCGTGA TATGGTCATA CTCTACCGGA CCCATGCCCA ATCCCGTGTT TTTGAAGAAG TTTTTCTTCG TCAAGGCATT CCCTATAGTA TCTTTGGTGG GCAGAAGTTC TATGACCGTA AAGAAATTAA AGATCTTCTT TCCTATTTAA GAGTAATTGC GAACCCTGTA GACAGCCAGA GCCTGTTGCG TATAATTAAC GTACCCAAAA GGGGAGTGGG GGCTGCATCC ATTGAAAAGC TGACCAACTT TGCCACAGAA AGAGATCTCA CTGTCTTAAT GGCTCTGGCT CTGGTGGATG ATATTCCTGG TGTGCCGGCT AAAGCCCGCA AGCAATGTAG AGAACTGGCA GACAACCTTG CCAGTTTGAA GAAACAGGTG GAGTTCCTTT CTGTAACGGA GATCACCGAA GAGGTTCTAA ATCGCACTGG CTATAAGGCT GAACTGGAAC TGGAAAATAC CGTTGAGGCC AGAACCCGCT TGGAGAACTT GCAGGAATTC CTCACGGTTA CAAAAGAATA TGATAAACAA CAGGGGGAAG AAACCGGGGG GCTGGCGGAT TTCCTTTCTA CCATTTCCCT GGTAACCGAT TTGGATCGGC ACGACCCCCA AGCAGATCAA ATTACTTTAA TGACACTACA CAGTGCCAAA GGGCTGGAAT ATCCGGTAGT CTTTTTAACC GGCATGGAAG AAGGCGTGTT CCCCCACAGC CGGGCCCTTT ACGACGAAGA GGAACTGGAG GAGGAACGTC GACTGGCCTA TGTGGGTATT ACCCGGGCTG AAGAAGAACT ATACATTACC CACTGTTGGG AAAGAACCCT GTTTGGGCGT ACCAACATGA ATGCCAAATC CCGCTTCTTA GAGGAAATAC CCCTAGAACT GACCGTTGGC CAATCCCCTG TTAAAAAGCT AGCTGCGGGA TCCGGGCTTA TAAAATCCAG TTTATTTAAT AAAACCGGTA CAATAGCGAC CCAAGCCCCA GCCGCCCCTG CGGCAGTTCC TAAGAGTTAT TTACTGGGAG ACAAAGTTCG GCATGCCAAA TGGGGTGACG GGGTTATCGT GAAAGTAAAG GGCAATGGCG GTAATGCAGA AATTACTGTG GCATTTCCTG AAATGGGCCT AAAAACCCTG ATTGCCCAGT ATGCACCACT GGAAAAGATC TAA
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Protein sequence | MNILSQLNPA QEEAVQHTEG PLLVLAGAGS GKTRVLTHRI AQILSQGVRP YNILAITFTN KAANEMRARV ENLVPQAAKD LWVTTFHSAC LRILRREIDV MGYGSNFSIY DDADQQTVIK ECLKELEIDE KRFQPRAMLS AISGAKNKLQ TPAQYDRQAF EYFEQVAARV YRLYQEKLFK NNAVDFDDLI MLTVRLFKEN PDVLAYYQNK FKYILVDEYQ DTNHTQYVLV NMLAESHRNV CVVGDPNQSI YKWRGADINN ILDFERDYPE AKVVKLEQNY RSTGNILQAA NAVIKNNAEA KDMKLWTSKG EGNRIHIYRA ENERFESMYI ADRVKDLRFS HNRKYRDMVI LYRTHAQSRV FEEVFLRQGI PYSIFGGQKF YDRKEIKDLL SYLRVIANPV DSQSLLRIIN VPKRGVGAAS IEKLTNFATE RDLTVLMALA LVDDIPGVPA KARKQCRELA DNLASLKKQV EFLSVTEITE EVLNRTGYKA ELELENTVEA RTRLENLQEF LTVTKEYDKQ QGEETGGLAD FLSTISLVTD LDRHDPQADQ ITLMTLHSAK GLEYPVVFLT GMEEGVFPHS RALYDEEELE EERRLAYVGI TRAEEELYIT HCWERTLFGR TNMNAKSRFL EEIPLELTVG QSPVKKLAAG SGLIKSSLFN KTGTIATQAP AAPAAVPKSY LLGDKVRHAK WGDGVIVKVK GNGGNAEITV AFPEMGLKTL IAQYAPLEKI
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