Gene Dred_2343 details

Gene Information

• Locus tag: Dred_2343
• ID: 4956847
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 2561747
• End bp: 2562178
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640181515
• Product: putative endoribonuclease L-PSP
• Protein accession: YP_001113678
• Protein GI: 134300182
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0251] Putative translation initiation inhibitor, yjgF family
• TIGRFAM ID: [TIGR00004] endoribonuclease L-PSP, putative

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.435007
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCACGAGA AAAAAGTTAT CAGCACCGAC AAAGCTCCTG CTGCCATTGG TCCTTACTCC 
CAGGCCATTG CCTTTGGTCC ATTAATTTTT ACTTCTGGTC AAATTCCCTT TGACCCCGCC 
ACCGGTAATC TGGTTGCCGG AGATATACAG GAGCAAACCC GCCGCAGTCT GGAAAACATT 
AAGGCAATCC TAGAAGCCGC CGGTGCCAGC ATGGAACAGG TAGTCAAGAC CACCGTATTC 
GTAAAGGATA TGAATGATTT TGAGAAGATT AACCAGGTTT ACGGTGAGTA TTTCCCCAAT 
CCTTCGCCGG CTCGTTCCCT GGTTCAGGTA GCTCGCCTAC CAAGGGATGT GGGTATTGAG 
ATTGAGGTTA TTGCTGCACC GGGTCATGGT CATGCTGAAA GTGGTGGCGG TGGTTGCGGC 
TGCGGACATT AG 

 

Protein sequence

MHEKKVISTD KAPAAIGPYS QAIAFGPLIF TSGQIPFDPA TGNLVAGDIQ EQTRRSLENI 
KAILEAAGAS MEQVVKTTVF VKDMNDFEKI NQVYGEYFPN PSPARSLVQV ARLPRDVGIE 
IEVIAAPGHG HAESGGGGCG CGH