| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2340 |
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| Symbol | gatB |
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| ID | 4957031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2558367 |
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| End bp | 2559806 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640181512 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001113675 |
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| Protein GI | 134300179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAC AGTATGAAAC TGTCATCGGT ATTGAAGTAC ACGTTGAACT GAAAACCAAC
ACAAAGATTT TTTGTAACTC CACCACCGAA TTTGGTGGGG ATCCAAACCA TCATACCTGT
CCCGTGTGTC TGGGACTCCC CGGTACCCTA CCGGTGTTAA ACAAAAAAGT GGTAGAATAT
GCGGTGCGGG CATCCCTGGC ACTGAACTGT CAGGTAGCCA ACTTCTCCAA GTTTGACCGT
AAAAATTACT ATTATCCGGA TTTACCGAAA AACTATCAGA TTTCCCAGTA CGATCTGCCC
ATTGCTGAGC ATGGTTATCT GGATATTGTG GCGGATGGAC AGCCAAAACG CATTGGCATC
ACCCGTTTAC ATATGGAAGA GGATGCAGGT AAACTGGTAC ACCAGGGGAA TATCGTAACT
ACTCCTTACT CCCTGGTGGA CTATAACCGT ACGGGTGTAC CTTTAATTGA AATTGTTTCT
GAACCGGATA TGAGATCATC AGAAGAAGCC AGGGCCTATG TGGAAAAGCT GAAGGCAATT
GTCCAGTACA CTGGTGTATC TGATTGCCGG ATGGAAGAGG GCAGCCTGCG CTGCGACGTA
AACGTGTCGG TTCGTCCAGT GGGGCAAAAG GAATTCGGGA CCAAGGCTGA GATTAAAAAT
CTTAACTCCT TTAGAGCATT ACAGCGGGCT CTGGATTTTG AGGTTGAAAG ACAAATAGGT
GTGTTGGAAT CCGGCGGAAG GATTATTCAG GAAACCCGCA CCTGGGATGA GGCAAGGGGT
ATTACCGTTT CCATGCGCAG TAAGGAAGAG GCCCATGACT ACCGCTATTT CCCAGATCCA
GATCTGGTAC CTCTGGTGTT GGATAACCAG TGGATTGATT TTATTCGTGA ATCACTGCCA
GAATTACCAG ATCAGCGTCG GAGTCGGTAT ATTACAGAAT ATGGTTTACC GGAATATGAT
GCCGCGCTAT TAACCTTAAC CAAAGAAATG TCCGACTACT TTGAAGAAGT TATGGAGCAT
TATAATAATC CCAAAGCTAT TAGCAACTGG ATCATGGGTG AACTGAGCCG TCTGCTTAAT
GCTGGTGGAA TTGAGATTAC CGCTTGTAAA ATAAAGCCTG CCCAGTTGGC GGAAATGTTA
AAACTATTGG ATAAAGGGAC CATTAGTGGC AAGATTGCCA AAGCCGTTTT TGAAGAAATG
TTTGCCTCTG GTAAAGACCC GGAAGCAATT GTAAAAGAAA AGGGTCTGGT CCAGATCTCC
GATGAGGGTG CCATTGCTTC TATTGTAGAT GAAGTGATTG CTGCCAATCC AAAATCAGTA
CAGGATTATC AAGCAGGTAA AACCCAGGCC ATTGGCTTCC TGGTGGGCCA AGTCATGAAA
GCCACCAAGG GTAAAGCGAA CCCAGAGATG GTTAATAAAA TGCTGCGGGA AAAATTATAA
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| Protein sequence | MTQQYETVIG IEVHVELKTN TKIFCNSTTE FGGDPNHHTC PVCLGLPGTL PVLNKKVVEY
AVRASLALNC QVANFSKFDR KNYYYPDLPK NYQISQYDLP IAEHGYLDIV ADGQPKRIGI
TRLHMEEDAG KLVHQGNIVT TPYSLVDYNR TGVPLIEIVS EPDMRSSEEA RAYVEKLKAI
VQYTGVSDCR MEEGSLRCDV NVSVRPVGQK EFGTKAEIKN LNSFRALQRA LDFEVERQIG
VLESGGRIIQ ETRTWDEARG ITVSMRSKEE AHDYRYFPDP DLVPLVLDNQ WIDFIRESLP
ELPDQRRSRY ITEYGLPEYD AALLTLTKEM SDYFEEVMEH YNNPKAISNW IMGELSRLLN
AGGIEITACK IKPAQLAEML KLLDKGTISG KIAKAVFEEM FASGKDPEAI VKEKGLVQIS
DEGAIASIVD EVIAANPKSV QDYQAGKTQA IGFLVGQVMK ATKGKANPEM VNKMLREKL
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