Gene Dred_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2312 
Symbol 
ID4958333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2529282 
End bp2531033 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content47% 
IMG OID640181484 
Productpyruvate kinase 
Protein accessionYP_001113647 
Protein GI134300151 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGTA CAAAGATTGT TTGCACCATC GGTCCCGCCA GTGAAGATGT GGAAACGCTG 
AAAAATATGA TGCTGGCAGG CATGAATGTT GCAAGATTAA ACTTTTCCCA TGGTACCCAT
GAGGACCATG CCAAGAGAAT TGCTGCTATT CGCCAGTCTG CAGATGAATT AAACAAAAAT
ATTGCCATTC TGCTAGATAC CAAGGGTCCG GAAATTCGTT TAAAGAAATT TGCCCAACCG
CCGGTTATCC TAAAACAGGA TCAGCAATTT ACCCTGACAA CCAGGGAGGT TACCGGTGAC
AATACCATTG TGTCTGTAAC TTATCAGGAT TTGCCCAAGG ATGTGAAGCC TGGCAGTCGG
ATAGCTGTGG CAGATGGGTT AATCGAAATG GTTGTGGAAT CTGTGGAGGG ACCAGATGTT
CATTGTAGAG TCGTTAATGG TGGTCAACTT TCCAACCAGA AGGGAGTTAA TTTACCTGGT
GTAAATGTAA ACCTTCCTTC GATTACCGAA AAGGATATTG AGGACATTCG CTTTGGTATA
GAGCAAAGGG TAGATTTTAT TGCTGCATCC TTTATTCGCA AACCCGGGGA TGTCCTCGCC
ATTCGCCAAA TCCTTGAGGA ATATGATGCG GATATTGATA TCATAGCTAA GATTGAAAGT
CGCCAGGGTG TGGAGAATCT GACTGGTATT ATTAATGTTG CAGATGGTAT CATGGTGGCC
AGAGGTGACT TGGGCGTTGA AATCCCTGCA GAAGAAGTAC CTGTCTTACA AAAGACGATG
ATTGAAATGT GCAACAGGGC AGGTAAACCA GTTATTACTG CTACACAAAT GCTGGAGTCC
ATGACCCAGA ATCCAAGACC AACCAGGGCC GAGGCCAGCG ATGTGGCTAA TGCCATTTTT
GATGGAACCG ATGCAATTAT GCTTTCCGGC GAAACAGCTG CGGGTAAGTA TCCTGTACAA
ACCGTTGAAA CCATGGCTCG TATTGCCCAG CGGGCAGAGC TTGCTGTAAA TTTTGATGAC
CTGCTGGAAA TCAGAGGAGC TGCCATACAG AGAACGGTCA CCGATGGTAT TAGCCAGGCC
GTTTGCAGTG TGGCTAGGGA ATTGGGTGTA ACCGCCATTG TAACCGCGAC GGCCAGCGGA
CATACCGCCA GAATGATTTC CAAGTATAGG CCCAAAGTAC CTGTGATTGC TGTGACACCC
AGATCCAATG TGTTAAGAAA AATGGCTCTG GTTTGGGGGG TTGTTCCTCT TTTAATTGAA
GATGTACATG GTACAGATGA AATGATTAAT ATATCCGTGG AAGCGGCCCT GGCCTCCGGA
CATATTACTG CTGGCGACCT AATTGTTATT ACTGCCGGTG TACCGGTGGG TGTTCATGGT
ACCACCAATA TGATGAAGGT TCACACAGTG GGGACTCTGC TGGCCAAAGG AACAGGCATT
GGCCAGAAAG CTGTCACAGG TAAGGTTAGG ATTTGTCGAA CGGCGGAGGA AGCCATGGTT
AAGGTTCAGC CGGGTGATAT TTTGGTGACT ATGGCCACTG ATCGTGACTT CGTGTCTGCT
ATGCAGAAAG CCAAAGCCGT GATAACGGAA GAAGGTGGTC TTACTTCCCA TGCTGCCATT
GTGGGACTGG AATTTGGCTT ACCCGTTATA GTAGGCGTTG ATAACGCCAC TGGTATTCTA
CCAGACGATG AAATTATTAC GGTGGATAGC CAGCGAGGGC TGATTTACGG CGGTGTTGCC
AGAGTTTTAT AG
 
Protein sequence
MRRTKIVCTI GPASEDVETL KNMMLAGMNV ARLNFSHGTH EDHAKRIAAI RQSADELNKN 
IAILLDTKGP EIRLKKFAQP PVILKQDQQF TLTTREVTGD NTIVSVTYQD LPKDVKPGSR
IAVADGLIEM VVESVEGPDV HCRVVNGGQL SNQKGVNLPG VNVNLPSITE KDIEDIRFGI
EQRVDFIAAS FIRKPGDVLA IRQILEEYDA DIDIIAKIES RQGVENLTGI INVADGIMVA
RGDLGVEIPA EEVPVLQKTM IEMCNRAGKP VITATQMLES MTQNPRPTRA EASDVANAIF
DGTDAIMLSG ETAAGKYPVQ TVETMARIAQ RAELAVNFDD LLEIRGAAIQ RTVTDGISQA
VCSVARELGV TAIVTATASG HTARMISKYR PKVPVIAVTP RSNVLRKMAL VWGVVPLLIE
DVHGTDEMIN ISVEAALASG HITAGDLIVI TAGVPVGVHG TTNMMKVHTV GTLLAKGTGI
GQKAVTGKVR ICRTAEEAMV KVQPGDILVT MATDRDFVSA MQKAKAVITE EGGLTSHAAI
VGLEFGLPVI VGVDNATGIL PDDEIITVDS QRGLIYGGVA RVL