Gene Dred_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2240 
Symbol 
ID4957849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2448829 
End bp2450013 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content41% 
IMG OID640181414 
Productextracellular ligand-binding receptor 
Protein accessionYP_001113578 
Protein GI134300082 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ATTTTAGATT AGCCGCCTTG CTAGTAGCCC TAGTCATGCT AGCCGGATTG 
GTTAGTGGAT GTGGCGGCGG CGGAGAAGAA AAGAAAGCAG CCGATGCCAA TGAAATCGTC
ATTGGTGGTA ACCTTGAATT GAGCGGTCCT GTTGCTACCT TCGGTACAGC CATGAAAAAT
GGCGCCGAGA TGTATTTTGA AGAAGTAAAT GCTGCTGGTG GAGTTCTTGG AAAGAAAATT
AAGTTTAATG TTATGGATAA TAAATCAGAT GCAACAGAAG CTGCGAACGT AGCAACTCGC
TTAATTACCC AAGACAAAGT AGTAGCAGTA ATGGGTGCTG CAACTTCCGG CAATACCATG
GGTTTTATGC AAGTGGCTAC AGATAACAAA GTTCCCATTA TCACTCCCTC TGGTACTGCC
TTGGAAGTAA CCGTTGATCC TAACACTAAA AAGGTTCGCG ACTATGTTTT TCGTACCTGC
TTTATCGATC CTTTCCAAGG CATTGTAATG GCTAACTTTG CCACTAACGA TTTGAAAGCT
AAGACAGCTG TTCTTTATGT TGATAACCAG TCTCCCTATG CCAAAGGTCT GGCCCAGTTC
TTTAAAGATT CCTTCATTAA ACAAGGTGGC AAAATTGTTG GTGAGGAAGC CTTTATGCCA
GAAGACCAAG ATTTTAAAGC AACTTTAACA AAAATAAAAG GTTTAAATCC AGATGTAATC
TATGTTCCTG CTTATTATGA GCCAGTAGGT AAGATCGTTA AGCAAGGTAG AGAAATTGGT
ATTACAGTTC CCTTCCTGGG TGGCGACGGT TGGGATTCTC CTAAATTACC GGAAATTGCT
GGTGGTGCAG CCCTAAACAA TACCTATTTT AGCAATCACT ATTCATCTCA GAAAGATGAC
CCTGAAATTA AAGGTTTTGT CGAAAAATAT CAAGCAAAAT TTGGCCAAGT TCCCGATACT
TTTGCAGCCC TTGGTTATGA TACTGCCGTA TTATTGGTAG ATGCCATCAA GCGTTCCGAA
GACGCATCTC CTGAGAAAAT AAAAGAAGCA CTGGCCAATG CCAAGGATGT GCAAGCTATA
ACTGGAAAAC TGTCATTTGA TGAGAACCAT AACCCCATAA AAGGTGCTGT TATCCTAGAA
ATGAAAGATG GCAAACAAGT CTATAAAACC TACGTACAAC CTTAA
 
Protein sequence
MKKHFRLAAL LVALVMLAGL VSGCGGGGEE KKAADANEIV IGGNLELSGP VATFGTAMKN 
GAEMYFEEVN AAGGVLGKKI KFNVMDNKSD ATEAANVATR LITQDKVVAV MGAATSGNTM
GFMQVATDNK VPIITPSGTA LEVTVDPNTK KVRDYVFRTC FIDPFQGIVM ANFATNDLKA
KTAVLYVDNQ SPYAKGLAQF FKDSFIKQGG KIVGEEAFMP EDQDFKATLT KIKGLNPDVI
YVPAYYEPVG KIVKQGREIG ITVPFLGGDG WDSPKLPEIA GGAALNNTYF SNHYSSQKDD
PEIKGFVEKY QAKFGQVPDT FAALGYDTAV LLVDAIKRSE DASPEKIKEA LANAKDVQAI
TGKLSFDENH NPIKGAVILE MKDGKQVYKT YVQP