Gene Dred_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2238 
Symbol 
ID4957828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2446871 
End bp2447851 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content41% 
IMG OID640181412 
Productinner-membrane translocator 
Protein accessionYP_001113576 
Protein GI134300080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGT TTAAGCGAAA TCTAGGCAAA CAAATTGTTA TTTTTATGGC CTTGCTGGCT 
ATTTGGGGTA GCGTTTATTT ATTAATCCAA ACCGGCATTA TCAATCCCTT TTATGAACTT
AACCTAATAT TAATCGGTAT CAATATTATT CTAGCGGTGA GCCTAAACCT AATTAATGGT
TTTAACGGAC AGTTTTCCAT CGGTCACGCT GGTTTTATGG CTATCGGAGC CTATGGGGCA
GCTATTATTA CTATCAAAGC AGGACTACCC TTCCCTGTGG CTCTTTTATT TGGGGCAGTT
GTTGCAGGAA TTTTCGGTAT TCTGGTTGGT CTGCCTACCT TGCGTCTACG GGGTGACTAC
TTAGCAATTG CTACCCTTGG TTTTGGAGAA ATTATTCGCG GTGTCATTGT TAATATTGAC
TACATCGGCG GTGCCTATGG CCTTTCCGGC ATCCCTAAAA TGGCTAATTG GACTTGGGTG
TTCTGGTTAA CTGTATTAAC GGTAGTAATT ATTACCAACT TTATAAATTC CACCCACGGC
AGGGCAACTG TATCCATTAG GGAGAATGAG ATTGCCGCCG AGGCCATGGG CATAAATACC
ACTAAATACA AGGTTATGGC TTTTACCATT GGTTCATTTT TTGCTGGTCT TGCTGGAGGA
TTACATGCCC ATTATTTCTA TACCATTCAG CCGGGTACAT TTAACTTCCT TAAATCCTTT
GATATTTTGG TAATGGTTGT TTTGGGTGGG CAAGGTAGTA TTACTGGTTC GATTATCGCT
GCCATTGGCC TTACTATTTT ATCGGCCTCT CTACAAAGTC TGGTTTCTCT ACGTTTGGTT
ATTTACGCCT TGTTATTGAT TATCATTATG ATATTTAGAC CCCAAGGTCT CATGGGCACC
AAGGAATTTA GTTTGAGTGT GTTTGGCGAA AAATCGAAGG ATAAGGGGGA GAAACAGCAT
GGCACTTCTA TCGGTCAGTA A
 
Protein sequence
MLMFKRNLGK QIVIFMALLA IWGSVYLLIQ TGIINPFYEL NLILIGINII LAVSLNLING 
FNGQFSIGHA GFMAIGAYGA AIITIKAGLP FPVALLFGAV VAGIFGILVG LPTLRLRGDY
LAIATLGFGE IIRGVIVNID YIGGAYGLSG IPKMANWTWV FWLTVLTVVI ITNFINSTHG
RATVSIRENE IAAEAMGINT TKYKVMAFTI GSFFAGLAGG LHAHYFYTIQ PGTFNFLKSF
DILVMVVLGG QGSITGSIIA AIGLTILSAS LQSLVSLRLV IYALLLIIIM IFRPQGLMGT
KEFSLSVFGE KSKDKGEKQH GTSIGQ