Gene Dred_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2233 
Symbol 
ID4958623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2442441 
End bp2443181 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content36% 
IMG OID640181407 
ProductABC transporter related 
Protein accessionYP_001113571 
Protein GI134300075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.693391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG TAATTGATAT TCAGCATTTA AGCAAATCCT TTGGAACCCA TGAAGTATTA 
AAAGACATTA ATTTTTCGGT TAATAAAGGA GAAGTTGTCT GTATCATCGG TTCATCGGGA
TCTGGCAAAT CAACTCTTCT TCGTTGTGTT AATCTTTTAG AAAAACCAAG TGGTGGTCAG
ATTATTTATA ATGGAGAAAA TATATTAGAT GATAAGCATG ATATCTATGC CTACCGTACA
AAGTTAGGTA TGGTATTCCA GCAATTTAAC TTGTTTAATA ATCACAATGT GTTAAACAAC
TGTGTCGTAG GACAAATAAA AGTACTAAAA CGTTCCAGAG AAGAAGCCGA AAAGGTAGCT
ATGAAGTATT TAAAAGTTGT TGAAATGGAT AAGTTTGTTA ACGCAAAACC TAAACAGTTA
TCAGGTGGTC AAAAACAACG TGTAGCTATT GCAAGAGCAC TTTCTATGGA ACCAGATGTG
ATGTTGTTTG ATGAACCAAC ATCAGCCCTT GACCCGGAGA TGGTAGGAGA AGTTCTCAAG
GTTATGAAGG AACTTGCTGA AACTGGTCTT ACCATGTTAA TCGTAACTCA TGAAATGGGG
TTTGCCAAAG AAGTATCTGA CCGTGTGGTA TTTATGGATA AAGGAGTTAT TGCAGAAGAA
GGAAGTCCAC AGCAAATCTT CAATAATCCT TCACAAGAAC GAACAAGGGA ATTCTTAAAA
CGTACCTTGA ATCAGATGTA A
 
Protein sequence
MEKVIDIQHL SKSFGTHEVL KDINFSVNKG EVVCIIGSSG SGKSTLLRCV NLLEKPSGGQ 
IIYNGENILD DKHDIYAYRT KLGMVFQQFN LFNNHNVLNN CVVGQIKVLK RSREEAEKVA
MKYLKVVEMD KFVNAKPKQL SGGQKQRVAI ARALSMEPDV MLFDEPTSAL DPEMVGEVLK
VMKELAETGL TMLIVTHEMG FAKEVSDRVV FMDKGVIAEE GSPQQIFNNP SQERTREFLK
RTLNQM