Gene Dred_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2208 
Symbol 
ID4956440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2417222 
End bp2417878 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID640181384 
Productvitamin B12 dependent methionine synthase, activation region 
Protein accessionYP_001113548 
Protein GI134300052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000120286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACTAC CTCAAATACC AGTGACAATT TCAAAGGATA AAGTTTTCTT GTATCTGGGT 
ATAAATGATC AGGGTAAGGT TAACTCGGAA ATGTTAGAGC AGATACAACA GGTTATTCAG 
GCGGGAAGAG TGCTCTTAAG TCCCACCGGG ATTTTAAACC AGGTACCATT GAGGTTTCAT 
GAAAAATCCA TTTTTATTAG CCATGACATT AAGCTTAGGA TGAAGAACAG CTTCCTTAAA 
AATTGCACCA CTGCCAGTGT GGTAGCAGTG ACCGTAGGAG AAACTATTGA TAAAGAAGTA 
GCTAAGTTAT TTGAAAAGGG AGAAGCGACC AGCGGGATTA TTCTGGACGC TGTGGGAACT 
GTTGCTGTTG AAGAAGCAGC GGATCAAGTG GTTAGGATGT TATCTCAGCA AATGAGATTA 
AAGGGACTTT TTGCAACACC AAGGCTTGGG CCTGGTTATC AGGGCATGCC CATAGAATGC 
TTGCCAGAGG TTCTTTATTT GGCAGGGGGA GGGAAAATTA AAATTACCAC CAATGAATAT 
TATCAGATGA TACCGGCTAA ATCCCTGTGC TTTATATTAG GTTGGAGTTC CCAACCTAGT 
AAATACCATA AAAAATGTGA TTTTTGCCAT AAAACAGACT GCCAATATCG TAGTTAG
 
Protein sequence
MLLPQIPVTI SKDKVFLYLG INDQGKVNSE MLEQIQQVIQ AGRVLLSPTG ILNQVPLRFH 
EKSIFISHDI KLRMKNSFLK NCTTASVVAV TVGETIDKEV AKLFEKGEAT SGIILDAVGT 
VAVEEAADQV VRMLSQQMRL KGLFATPRLG PGYQGMPIEC LPEVLYLAGG GKIKITTNEY 
YQMIPAKSLC FILGWSSQPS KYHKKCDFCH KTDCQYRS