Gene Dred_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2171 
Symbol 
ID4956125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2375329 
End bp2375766 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content40% 
IMG OID640181349 
ProductUspA domain-containing protein 
Protein accessionYP_001113513 
Protein GI134300017 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.198814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AGATTCTAGT GCCCCTGGAT GGTTCGGAAC GTTCAATTAA GGCCCTGTCC 
CACACTGTTG CGTTAGCAGA AAAATTGGCA GCTAAAGTAA CCCTAATGCA TGTCGTTCCC
AGTTTGCCAC CCTATGTTAA TACAGCAGTT GATCATTTAG GTCAGGTACA GCAATCTATC
ATTGAAGAAT TAATGAAAAA TGGCAAGGAG ATGCTAGAAC AATTTGTTTC CTCCATTTCA
GATAAAAATA TAGAAGTGGA CACATATACC GTCATGGGCC AACCAGCAGA TGAAATTTTA
GAAAAAGCGA ATCAGGATAA TTATGAATTA ATAGTGATCG GAAGCCGTGG CTTGGGAGAA
ATAAAGGGGT ACATCATGGG AAGTGTCAGT AACCGCGTCT CTCGTCATGC ATCCTGCCCA
GTTTTAATTA TAAGGTAA
 
Protein sequence
MYKKILVPLD GSERSIKALS HTVALAEKLA AKVTLMHVVP SLPPYVNTAV DHLGQVQQSI 
IEELMKNGKE MLEQFVSSIS DKNIEVDTYT VMGQPADEIL EKANQDNYEL IVIGSRGLGE
IKGYIMGSVS NRVSRHASCP VLIIR