| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2116 |
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| Symbol | |
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| ID | 4955301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 2312272 |
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| End bp | 2313645 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640181286 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001113458 |
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| Protein GI | 134299962 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.768773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGT TACAAAGATT GGAAAAGCAA AAATCACTTC AACCTGACCA TACTCAGCAG
GTTGAAATAG CCTTGGCACG TAGGGACCGT CGCCTTCAGG GCAAAGCCCC ATTGCAGGAA
CTGACCCTTA CCCTACATAA AAAAGTAATT GATAAACTGA AAGACATCCC GGAGGATGTT
AAAGATCACC CGGAGACCCT GGCCAAAAAA ATCGAGACTC TGGTAAATGA TTTATTAGAC
GAGGGTGAAG AAAATGTTGC CAGGCCCCAG CGGCAAATGA TCGTTGCAGA GATTATCGAT
GAAACCATTG GCTTCGGACC CATTACCACC CTGCTTAACG ATCCCAGCAT CTCCGAGGTC
ATGGTAAACG GCCCAGACCA AATCTACGTA GAACGGGATG GCAAACTGAT CCTTACAGGG
GTCAATTTCC GCGATAATGC CCATGTGCTA CACATTATTG ATAAAATTGT CGCTCCCATC
GGGCGAAGAA TTGATGAGAG TATGCCCATG GTGGATGCCC GCTTACCGGA CGGTTCCCGT
GTGAATGCCA TTATTCCTCC GTTGGCACTG AACGGACCCA CCATTACCAT TCGTAAGTTT
TCCAAGGATC CCTATACGGT TGATGATTTA ATTAATTTTG GTACCCTAAC ACCTCAAATG
GCCCAGTTTG TTGAGGCCTG CGTAAAAGCA CGCTTAAACA TTGTGGTTTC CGGCGGTACC
GGCAGTGGTA AAACCACAAC CTTAAACGTC CTTTCCTCCT TTATCCCTCC GGATGAAAGG
ATTGTGACCA TCGAAGACGC AGCGGAACTG CAGCTACGAC AGGAACATGT CATTACCCTG
GAAAGCCGCC CCCCAAACAT TGAAGGCAAA GGAGCTATCA CCATCCGTGA TTTGGTACGC
AATAGTCTGC GAATGAGACC GGAACGAATC GTGGTTGGCG AAGTCCGCAG CGGTGAAGCC
TTGGATATGT TGCAAGCCAT GAACACCGGT CACGACGGCT CACTGACCAC GGGGCACGCC
AACACCCCTC GGGATATGCT GTCTCGACTG GAAACAATGG TGTTGATGGC GGGTATGGAC
CTGCCGATTC GGGCTATTCG GGAACAAATA TCTTCAGCCA TTGACCTGAT CATTCAACAG
AGCCGCCTGA AGGACGGTTC CCGTAAGATA ACCCATATTA CTGAGGTCCA GGGCATGGAA
GGTGAAGTGA TTATCCTCCA GGATCTGTTT GTCTTTCACC AGACTGGCCT GGATGAAAAC
GGAAAAGTTA AAGGTACCTT TCATAGTACC GGTATTCGTC CCAAATTTAC TAGCCAGTTA
GAGACCATTG GTATCAAATT GCCCCCGGGT CTCTTCAGTC CGTCTCTCTT TTAA
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| Protein sequence | MSLLQRLEKQ KSLQPDHTQQ VEIALARRDR RLQGKAPLQE LTLTLHKKVI DKLKDIPEDV
KDHPETLAKK IETLVNDLLD EGEENVARPQ RQMIVAEIID ETIGFGPITT LLNDPSISEV
MVNGPDQIYV ERDGKLILTG VNFRDNAHVL HIIDKIVAPI GRRIDESMPM VDARLPDGSR
VNAIIPPLAL NGPTITIRKF SKDPYTVDDL INFGTLTPQM AQFVEACVKA RLNIVVSGGT
GSGKTTTLNV LSSFIPPDER IVTIEDAAEL QLRQEHVITL ESRPPNIEGK GAITIRDLVR
NSLRMRPERI VVGEVRSGEA LDMLQAMNTG HDGSLTTGHA NTPRDMLSRL ETMVLMAGMD
LPIRAIREQI SSAIDLIIQQ SRLKDGSRKI THITEVQGME GEVIILQDLF VFHQTGLDEN
GKVKGTFHST GIRPKFTSQL ETIGIKLPPG LFSPSLF
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