| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2088 |
|---|
| Symbol | |
|---|
| ID | 4955430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2283609 |
|---|
| End bp | 2285666 |
|---|
| Gene Length | 2058 bp |
|---|
| Protein Length | 685 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640181257 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_001113430 |
|---|
| Protein GI | 134299934 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGATA TATATAGTCC AATACAATAC ATGAAAGGCG TAGGTCCCCA GAGGGCTAAG
CAACTGGAAC GCCTGGGTAT TTTTACCACT TGGGATCTGC TTTATCATTT TCCTAGGGAA
TATCAGGACA GAAGTGACAT ACGACCAGCT CACTCCTTTA GCCAAGGGGA TCTTGCCACA
GTCAAGGGTA CTGTCATTGC AGCCCAGGAA AGCAAACCCC GCAGGGGCCT ATCCATAACG
AAATTAGCTT TACAGGAAGG GGCCGGCACC TTTTATGCTG TTTGGTTTAA CCAGACCTAT
ATAAAAAAAC AGTATCCGCC TGGTAAGGAA CTACTTATAA CAGGAAAGGT TGATCGGAAG
TTTGGTGTTC CTCAAATTCA GGTTACTGAC CATGAGGTCC TAGAGGGAGA TGAAGGGATG
CATAGCGGTA GAATTGTCCC CATCTATCCA CTGACAGAAA GTCTTAACCA GCGTTTTTTG
AGGTCCCTAA TCAAAACAAC CCTTGAACAA GTGGGGTCCT TAGCCAGGGA ATTTTTGCCG
GACTCTATGC TAGACCGTTA TAATTTGCCT TGCCTACCAG AGGCCCTTCG GGAAATTCAT
TTTCCTGAAA ATCAGGCATC CTGTCAACGG GCCCGACGAC GGTTTATTAT GGAGGAGCTT
TTCTTATTTG AGTTAGGGGT AAACCTCCAA AAGGGGCGTA TTCTTAAAAA GGTTAAAAAA
CACGAATACA TTGAAGAAGC CTTGTCAAAT CGTCTTCTCA TGAGCCTGCC CTTCCGATTA
ACTGAAGCCC AGAAACGTGT GTGGCGGGAG ATTGAGGAAG ACTTGAAAAG CTCTTTTCCC
ATGAACCGCC TGTTACAAGG GGATGTGGGG GCAGGTAAAA CAGTCATAGC AGCTTTGACC
CTCTGCAAGG CGGCTGGTTC TGGCCTACAA GGAGCCCTCA TGGCTCCTAC AGAACTCTTG
GCAGAACAAC ACGCCAAGGG CATAAAGGAT TTACTAGAAC CCATGGGGAT TAAGGTGGCG
CTGTTGACGG GCAGTGGCAA AAAAGGGAGA AAAAAGACAC TGGACGCCCT GGCCTCCGGG
GATATACAGG TGGCGATCGG AACCCATGCT TTGATATCCG AGGATGTCCA GTATAAAAAC
CTTGGCCTAG TTGTGGTGGA TGAACAGCAC CGCTTTGGGG TTCGCCAGCG TGCTGCCCTG
CAGGATAAAG GGGTTGCGCC GGATGTACTG GTGATGACTG CAACACCCAT TCCCCGTACC
CTGGCCCTAA CATTATATGG AGATTTGGAT GTATCCATCA TTGACCAGTT GCCACCTGGT
AGACAAGGGA TAAAAACCCA TCATGTCGGT TTAGCGCAGG CTGGCAAGGC TGTGGGATTG
ATTAAACAAC AAATAACTGA AGGCAGACAA GCCTACGTTG TCTGTCCGCT GGTGGAAGAG
TCGGAAAAAA TTGATACCCA GGCAGCAGTG GAATTGCATG GCAGACTTCA GAAGGCCCTT
GTTGATTGCT CCATAGGCTT GCTTCATGGA CGGATGAAAA CACAGGAAAA AGAGTTAGTC
ATGAATGAAT TTCGCAAGGG GACCATTGAT TTGTTAGTGT CCACCACCGT CATTGAGGTA
GGGGTGGATG TTCCCAATGC CACTGCCATG GTAATTTGGG ATGCCCAACG TTTTGGGTTG
GCTCAACTGC ACCAGCTAAG GGGTAGGGTA GGACGGGGCA GTCATCAATC CTACTGTATT
TTGGTCGGAG ATCCCACCAC CCGGGAAGCT AAAGAAAGAA TGGCCGCCAT GTGCCGGACC
CAGGATGGTT TTGTTTTAGC AGAAGAAGAT TTGAAGCTAC GGGGTCCCGG TGAATTTTTT
GGCACCCGAC AATCGGGTTT GCCAGAGTTT AAAATTGCCG ACCTGATTAG AAATGGTAAA
GAAATCGAAC AGGCAAAAAA GGAAGCGGAA GCCCTGCTAA GTTTGAATCC AGATTTAAGG
TCACCCATGC ATAAACAACT ATTTGAACAA TTTGCCAGTC GCTTCCCGGA TTTTGTTAAG
TACAGTGATG TAAGCTAA
|
|---|
| Protein sequence | MLDIYSPIQY MKGVGPQRAK QLERLGIFTT WDLLYHFPRE YQDRSDIRPA HSFSQGDLAT
VKGTVIAAQE SKPRRGLSIT KLALQEGAGT FYAVWFNQTY IKKQYPPGKE LLITGKVDRK
FGVPQIQVTD HEVLEGDEGM HSGRIVPIYP LTESLNQRFL RSLIKTTLEQ VGSLAREFLP
DSMLDRYNLP CLPEALREIH FPENQASCQR ARRRFIMEEL FLFELGVNLQ KGRILKKVKK
HEYIEEALSN RLLMSLPFRL TEAQKRVWRE IEEDLKSSFP MNRLLQGDVG AGKTVIAALT
LCKAAGSGLQ GALMAPTELL AEQHAKGIKD LLEPMGIKVA LLTGSGKKGR KKTLDALASG
DIQVAIGTHA LISEDVQYKN LGLVVVDEQH RFGVRQRAAL QDKGVAPDVL VMTATPIPRT
LALTLYGDLD VSIIDQLPPG RQGIKTHHVG LAQAGKAVGL IKQQITEGRQ AYVVCPLVEE
SEKIDTQAAV ELHGRLQKAL VDCSIGLLHG RMKTQEKELV MNEFRKGTID LLVSTTVIEV
GVDVPNATAM VIWDAQRFGL AQLHQLRGRV GRGSHQSYCI LVGDPTTREA KERMAAMCRT
QDGFVLAEED LKLRGPGEFF GTRQSGLPEF KIADLIRNGK EIEQAKKEAE ALLSLNPDLR
SPMHKQLFEQ FASRFPDFVK YSDVS
|
|---|
| |