| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2041 |
|---|
| Symbol | |
|---|
| ID | 4957994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2241369 |
|---|
| End bp | 2241866 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640181210 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001113383 |
|---|
| Protein GI | 134299887 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000212693 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATGGCA AGGGTCTAAT AAAGGGTCTG GGAGTGACGA TTAAGCATTT TTTTAAACCA
AAGGTAACGG TGCAATACCC CGAGGTGCGA TTGCCAATCC CAGAGAGATT TTTCGGCAGG
CCACAGTTTT TTTATGATAA GTGCATTGCC TGTAACCAGT GTGTGAACGC TTGTCCCAAT
AATGTTATAA AACTGGAAAC AGATACAGTG GATAAAAAGA AAGTGGTGAC CAGATACGAT
TTTGACCAGC AGTACTGTAT GTTTTGTGGT ATGTGTCAAG AGGCTTGTCC GAAGGATGCA
ATTAAATTTT CGGATGACTT TGAGTTAACC CAATATAACC GCCCAGATAT TAAGATTCAA
TTTGTTTCAC CGGAGCAGGT TGAAAAGAAA AAAGAAGAAC TTAGAAGGGC GGCGGCGGAA
AAGGCTGCGG CTGAAGCAGC TAAAGCTAGG GAGGAAGCGA AGGAAAATCC CGAAGGAACA
GGCAAGGAGG GGATGTAA
|
|---|
| Protein sequence | MHGKGLIKGL GVTIKHFFKP KVTVQYPEVR LPIPERFFGR PQFFYDKCIA CNQCVNACPN
NVIKLETDTV DKKKVVTRYD FDQQYCMFCG MCQEACPKDA IKFSDDFELT QYNRPDIKIQ
FVSPEQVEKK KEELRRAAAE KAAAEAAKAR EEAKENPEGT GKEGM
|
|---|
| |