| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1980 |
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| Symbol | hslU |
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| ID | 4958498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2173752 |
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| End bp | 2175152 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640181147 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001113323 |
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| Protein GI | 134299827 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000459444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCCC TGACGCCACG ACAAACCGTA AGAGAGCTTG ATAAATATAT AGTGGGCCAA
GAAAAAGCCA AAAAAGCAGT GGCTGTGGCT TTGCGAAACA GGTACCGTCG CAGTAAGTTG
AAAGAAGATT TGATTGATGA GGTTGTACCG AAGAATATTT TAATGATTGG CCCAACGGGC
GTAGGTAAAA CCGAAATTGC CCGTCGTTTA GCTAAACTGG TAAAAGCCCC TTTTGTTAAA
ATTGAAGCCA CTAAATTTAC AGAAGTGGGC TATGTGGGGC GGGATGTAGA ATCCATGGTC
AGGGATTTGG TCGAAACCTC CATTCGCATG CTTAAGCAAG AAAAAGTAGA AGAAGTGGAA
GAACGGGCCA AGCGACTGGC TGATGAAAGA ATTATTGAAC TTTTAGCACC CTATCCGAAC
CGGCCTACCC AAACAAAAAA TCCCTTTGAA ATGCTATTTG GCGGGGTGCA GGATACTCAA
CAGGAAGATA AATCCTGGGA GCAGCAAAAT AGTAGGATTA AGTTTGAGAG GGAAACTCTA
CGGGAAAAAA TGTCCCGCTG TGAGTTAGAA AAAGATTATC TAGAAATTGA AGTGGAAGAT
CAAAGCACAC CTATGCTTGA GGTTTTTAGT AACAGTGGCG TAGAAGAGAT GGGCGTTAAC
ATGCAAGACG TGTTAGGGAG TATTTTCCCA AGGAAAAAAC GTAAACGCAA GGTCACTGTA
GAAGAGGCTC GCAAGATATT AACCCAGCAA GAAGCTCAGA AATTGATCGA TATGGATGAA
TTGACTGCAC AGGCGGTGAA GCGTGCAGAA GATCATGGGA TTATCTTCCT TGATGAGATT
GATAAAATTG CTACAAGGGA AGGGACCACT GGTAGTGCAG ATGTATCACG TGGAGGCGTA
CAAAGGGATA TCCTTCCTAT TGTGGAAGGA TCCACAGTAA TGACAAAGTA TGGCCCTGTA
AAGACAGATC ATATCCTTTT CATAGCAGCC GGGGCTTTCC ATATAGCAAA ACCCTCTGAT
TTAATTCCAG AGTTACAAGG ACGTTTTCCC ATCAGGGTAG AGTTAGAAAG CCTGAGCAGA
AGTGATTTTG AACAAATTTT AACAGAGCCG CAAAACTCCT TAATCAAACA ATACACTGAG
TTATTAGGGA CTGAAGGACT TAAAATTGAA TTTTCTAAAA ATTCTCTTGT AGAAATTGCC
GATATTGCTT ATACTGTAAA TGAACAAAAT GAAAACATTG GAGCAAGGCG GTTGCACACC
ATTCTCGAAA AATTATTGGA GGATGTTTCC TTCGAGGCTC CAGAACTTAA TGGACAGTCA
CTCACTATTG ACAGTGATTA TGTTCGTGAG AAGCTAAAGG ATGTTGTAAC AAATCGTGAT
CTTAGTCGTT ATATTCTTTA A
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| Protein sequence | MEALTPRQTV RELDKYIVGQ EKAKKAVAVA LRNRYRRSKL KEDLIDEVVP KNILMIGPTG
VGKTEIARRL AKLVKAPFVK IEATKFTEVG YVGRDVESMV RDLVETSIRM LKQEKVEEVE
ERAKRLADER IIELLAPYPN RPTQTKNPFE MLFGGVQDTQ QEDKSWEQQN SRIKFERETL
REKMSRCELE KDYLEIEVED QSTPMLEVFS NSGVEEMGVN MQDVLGSIFP RKKRKRKVTV
EEARKILTQQ EAQKLIDMDE LTAQAVKRAE DHGIIFLDEI DKIATREGTT GSADVSRGGV
QRDILPIVEG STVMTKYGPV KTDHILFIAA GAFHIAKPSD LIPELQGRFP IRVELESLSR
SDFEQILTEP QNSLIKQYTE LLGTEGLKIE FSKNSLVEIA DIAYTVNEQN ENIGARRLHT
ILEKLLEDVS FEAPELNGQS LTIDSDYVRE KLKDVVTNRD LSRYIL
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