| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1979 |
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| Symbol | |
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| ID | 4958167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2172945 |
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| End bp | 2173730 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640181146 |
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| Product | transcriptional repressor CodY |
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| Protein accession | YP_001113322 |
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| Protein GI | 134299826 |
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| COG category | [K] Transcription |
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| COG ID | [COG4465] Pleiotropic transcriptional repressor |
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| TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000233439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGACCT TATTGGAAAG AACACGTACA ATTAATAAAC TATTACAGAA ATCTGCTGGT
TATCCTGTTG ACTTTGGCGA AATCGCAGAT GTGTTATCTG AGAACATTGA GGCAAACTGC
TATATTATTG ACCGTCGTGG TCGGGCCCTT GGCTACAAAT TTATGCCAGA GTTTGCCTGT
GATATTATGA AAGATATTGT TGAAGGTTCC AAACGTTTTC CTGAGGAATA CAACGAAGGA
CTTTTGGGAG TTAGTGAAAC CCATGCAAAC TTCTGCCAGA CCTATGATGC ATGTGTATTC
TTTGAGGAAG AAAAGTGTAA GGGTCAAAAC AAAGTTACCA CTGTGGTTCC CATTGTAGGT
GCTGGTTCAC GTTTAGGAAC CTTGGTGTTG GCTAAGTTTA ACCAAAACTT TACTGATGAG
GACTTGATCT TGGCCGAATA TGGTGCCACG GTAGTTGCTA TGGAAATTCT ACGTGCAAGG
GCAGGAAGAA TGGAAGAAGA AGCAAGGAAG AAAGCAGCTG TACAAATTGC CCTCGGTACC
TTATCTTACT CTGAATTAGA TGCAGTTCAA CACATTTTTG AACAATTGGA AGGGGACGAG
GGGGTCCTGG TTGCCAGCAA GATTGCTGAT AGGGTGGGTA TCACGCGGTC AGTTATTGTA
AATGCATTGC GTAAATTTGA AAGCGCTGGG GTGATTGAGT CCAAATCCTT GGGAATGAAG
GGTACTTACA TTCGGGTGTT AAACGATCGT TTGATCGAGG AACTGCAAAG GCTGAAGCAC
AATTAA
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| Protein sequence | MKTLLERTRT INKLLQKSAG YPVDFGEIAD VLSENIEANC YIIDRRGRAL GYKFMPEFAC
DIMKDIVEGS KRFPEEYNEG LLGVSETHAN FCQTYDACVF FEEEKCKGQN KVTTVVPIVG
AGSRLGTLVL AKFNQNFTDE DLILAEYGAT VVAMEILRAR AGRMEEEARK KAAVQIALGT
LSYSELDAVQ HIFEQLEGDE GVLVASKIAD RVGITRSVIV NALRKFESAG VIESKSLGMK
GTYIRVLNDR LIEELQRLKH N
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