Gene Dred_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1941 
Symbol 
ID4956285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2132669 
End bp2133691 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content40% 
IMG OID640181109 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001113285 
Protein GI134299789 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.733379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACAG TTAATCTAGT TATTGTTGGT GCTACTGGAG CAGTAGGGAA AGAAATTTTA 
AATATATTAA AAGAGCGCAA TTTTCCTATT AATAAGTTAA GACTTTGTGC CACTTCCCGC 
TCTGCAGGGA CTGAAATAGA GTTCCAAGGT CATAAGTATC TGGTTGAAGA AACCACCCCC 
GATTCCTTTA ACGGGATGGA TGTAGCTTTG TTTGCTGGTG GAAAAGCAAG TTTAGAGTTT 
GGGAAAGCAG CGGTTGAACG TGGTTGCGTA GTTATTGATA ACAGTAGTAA TTATCGAATG 
GATCCCGAGG TTCCTTTGGT GGTGCCGGAA GTAAACCCGG AGGATGTTAA AAAACACAAA 
GGAATCATCG CCAATCCCAA CTGTTCTACC ATTATTATGG TAGTTGCTTT AAAACCCCTT 
CATGATGCTG CTGGCATTAA GCGGGTTGTT GTATCAACTT ATCAAGCTGT ATCTGGAGCT 
GGTAAGGAGG GAATTGAAGA ATTAACTGAA CAGGTGAAAG CAACCCTTGA CGGAAGGGAA 
TATCCTCCTA ATAAATTTGC ACATCAGATT GCCTTTAATC TAATTCCACA TATTGATGTA 
TTTCAAGAAA TGGATTACAC CAAAGAAGAG TGGAAAATGG TTAAAGAAAC ACAAAAAATT 
ATGCATGATG ACAATATTAA AATCACTGCT ACCACTGTTC GGGTACCAAT TTACCGTAGC 
CACTCGGAGT CCATTAATAT CGAAACAGAA GAAAAAATTA CAGCTGACCA GGCCAGAGAA 
ATATTGGCCA ATGCACCTGG GATCATTGTT CAGGATGATG TGACCAATAA GGTTTATCCT 
ATGCCTCTGT TTACATCAGA CCGTGATGAA GTGTTTGTAG GACGTATTCG TGAAGACAAT 
ACCATTGATA AGGGTCTGAA TCTTTGGGTG GTGGGTGACC AGATTCGCAA GGGTGCGGCC 
ACCAACGCCG TTCAAATTGC TGAATTAGTG CTAAAATATG ACAGCTTAAT GAAGAAGGAG 
TAA
 
Protein sequence
MNTVNLVIVG ATGAVGKEIL NILKERNFPI NKLRLCATSR SAGTEIEFQG HKYLVEETTP 
DSFNGMDVAL FAGGKASLEF GKAAVERGCV VIDNSSNYRM DPEVPLVVPE VNPEDVKKHK 
GIIANPNCST IIMVVALKPL HDAAGIKRVV VSTYQAVSGA GKEGIEELTE QVKATLDGRE 
YPPNKFAHQI AFNLIPHIDV FQEMDYTKEE WKMVKETQKI MHDDNIKITA TTVRVPIYRS 
HSESINIETE EKITADQARE ILANAPGIIV QDDVTNKVYP MPLFTSDRDE VFVGRIREDN 
TIDKGLNLWV VGDQIRKGAA TNAVQIAELV LKYDSLMKKE