Gene Dred_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1933 
Symbol 
ID4956809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2122621 
End bp2123748 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content37% 
IMG OID640181102 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_001113278 
Protein GI134299782 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.806249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAG ATATTTTCAT TAATCAAGCT TTACAACAAA ATGATGCTTG TTTTATTGAT 
TTACGGTCAG AGGGAGAATT TGCAGAAGGT TCGATTCCTG GTGCAATAAA CATTCCTTTA 
TTTACAAATG AAGAAAGGGC AAAGGTTGGC ATAGTATACA AACAGGTTGG GACGGAAGCC 
GCCAAAAGAT TGGGTTTAGA AATTGCAAGC CCAAAACTTC CGGCACTATA TGATGATATT 
TCAAAATTGG CTAAGGATAA AACGGTTTTT CTTTACTGTT GGCGTGGAGG AATGCGTAGC 
AAATATGCAG CCTCGATCTT AAATACCCTA GGCATAAACC TTTATCGGAT ACAGGGTGGT 
TATAAAGCTT ATCGTAAGCA TATACATGCT TATTTAGATC AGGACTTGAT ACCGCATAAA 
TGCATTGTTT TACATGGTTT AACCGGAGTA GGGAAAACCA TTGTTTTAAA TAACTTAAAT 
AGGTTTGGCA TACCTGTTTT AGATTTAGAA TCTATTGCCT GTCATAGAGG ATCAGCCTAT 
GGTAAGATTG GTTTGCCAGA ATCACCTTCC CAAAAGGATT TTGAGTCAAG TATTGTACAA 
ACCCTTATAA GAGCAGAAGA TAAAGGAATG GTAGCTGTAG AGTGTGAAAG TCGCAGAGTG 
GGTAAACTAA TCGTACCAAC TTCAGTTTTC AACGCCATGT CACAGGGTTA TCGAGTTTTA 
ATGTATGCTT CAATAGAGAA GCGGGTGCAA AGGATTATAG ATGAATATAC AAAGGGCCCT 
GATAATAATA TTGAAATGCT GAAGTTAAGT ACAGCCCTAT TAAAGAAGTC TCTTGGAAAC 
AAAACTGTAG AAGAATTAAA TCAAAAGATC GATGAAAGAA AGTTTGAGGA GGTTATTCCT 
TACCTTTTAA CAAAGTATTA CGATCCTCTA TATAAATATC CTGATTCACC CAACGATGAA 
TATGATTTAT CTGTTGATTG TGATGATTTA AATGAAGCCA CAGGTATAAT TGCGAATTGG 
GTAACATCTT TACCCGAGTA TGGTATACCA GCGAAAATCG GAGGTGACGA TGGTGGCAGT 
AGGGGAAGCT TTAAGGAGCG CAAGAAAAGA AAAGGGTTAC TCGTTTGA
 
Protein sequence
MLKDIFINQA LQQNDACFID LRSEGEFAEG SIPGAINIPL FTNEERAKVG IVYKQVGTEA 
AKRLGLEIAS PKLPALYDDI SKLAKDKTVF LYCWRGGMRS KYAASILNTL GINLYRIQGG 
YKAYRKHIHA YLDQDLIPHK CIVLHGLTGV GKTIVLNNLN RFGIPVLDLE SIACHRGSAY 
GKIGLPESPS QKDFESSIVQ TLIRAEDKGM VAVECESRRV GKLIVPTSVF NAMSQGYRVL 
MYASIEKRVQ RIIDEYTKGP DNNIEMLKLS TALLKKSLGN KTVEELNQKI DERKFEEVIP 
YLLTKYYDPL YKYPDSPNDE YDLSVDCDDL NEATGIIANW VTSLPEYGIP AKIGGDDGGS 
RGSFKERKKR KGLLV