Gene Dred_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1921 
Symbol 
ID4957697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2110164 
End bp2111762 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content42% 
IMG OID640181091 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001113267 
Protein GI134299771 
COG category[K] Transcription
[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000118371 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCACA GAAAAGAGAC AAAGCTTTTT GGAAATCTTG AATTGGATCG CAGAATTGTT 
GATGGTTTAA AGGAAATGGG ATTTGAAGAA CCAACTCCTA TTCAGCAGCT GGCTGTGCCG
CAGGTTTTGG CAGGTTATGA TATGATTGGT CAAGCTCAGA CTGGTACAGG TAAAACTGCA
GCCTTTAGTA TTCCCATGAT TGAACGGTTG AATCCTAGAA AAAGAGAAGT TCAAACCATT
ATCATTACAC CTACACGTGA ACTGGCCATT CAAGTTGCAG AAGAGATTAG TAAGATTGGT
CGTTTTAGCC GCATAAAGGT ATTGCCCATA TATGGTGGAC AATCCATCGA GCGCCAAATT
CGATCTCTAC GACTAGGCGT ACAAGTGGTT GTGGGTACTC CTGGACGATT GTTGGATCAC
CTTCGGCGTC AGACATTAAA GGTTGATCAG GTTGACATGG TGATACTAGA TGAGGCAGAT
GAAATGCTGG ATATGGGTTT CATCGAAGAC ATAGAGGAGA TCATTAGACA TACTCCGGCA
GAAAGACAGA CCTTGCTTTT TTCTGCCACT ATGCCTCAGG AAATCATTAG GCTGGCTCAG
CAATATATGA CAGATCCCAA ATATGTCACT GTTAGTAAAA CCAATCTGAC GGTACCTCAA
ATTGAACAGG TCTTTTATGA GGCACCGGAA AAAAATAAGT TAGAAGCGCT TTGCAGAATA
CTTGATATAA GTGATATTTC TCAGGGTATC CTTTTTTGCC GTACCAAACG AGGTGTTGAT
GAATTGGTTG CTGGCTTGCA AGCCAGAGGG TTTGCTGCTG CTGCCCTCCA TGGGGACCTC
AGCCAACAAC AAAGAAATAC TGTCATGAGA CAGTTTCGTT CAAGTGAGGT TGAACTGTTG
GTAGCCACCG ATGTAGCAGC TAGGGGATTG GATATTGAGG GTGTTTCCCA TGTAATCAAC
TATGATATTC CTCAGGATCC AGAGTTTTAT GTCCACAGGA TTGGTCGAAC AGGTAGAGCC
GGTAGATCAG GTGTTGCCAT TACGATCATT AGCCCTCGAG AATACCGTCA ACTACGCCAA
ATTGAAAACA TAACTAAAAC CCACATTAAG AGACAAAAAC TACCCAGTAT TGCCGATGTG
GTAGAACGTC AAAAGGAAAG TATTAAGGAA AGATTGATTC AAATTATTAA TGAAGGAAAA
TTAGGTTACT ACCGTTCGGT TGTTGATGCA CTAGTAGATG AGTATGATCC GATGGATATT
GCCGCGGCAG CTCTCAAACT TTCCATGGAT TTGGAACCTA ACAGTGAGGA TGTTAATCTT
AACACTGTTA ATTTCGGCAA TACCGGTGCA AGGCCTGGTA TGGTAAGGTT ATTTCTTACA
CTTGGAAGAA AAGACCGGGT AACCCCGCCA GAGATTATTA AGCTAGTATC AGATGAATCT
GGCATCTCAG GTGGTCAAAT TGGTAACATT AACATATATG AAAATTTTAG TTTCGTTGAG
GTTCCTGAAG ATTGGGCCAA CTGTGTAATC AGTTGCTTGC ATAGGCAGCA TTTTAAAGGC
AGGAGAATAT TTGTCGAACC TGCCCGTGCC AGAAAGTAA
 
Protein sequence
MNHRKETKLF GNLELDRRIV DGLKEMGFEE PTPIQQLAVP QVLAGYDMIG QAQTGTGKTA 
AFSIPMIERL NPRKREVQTI IITPTRELAI QVAEEISKIG RFSRIKVLPI YGGQSIERQI
RSLRLGVQVV VGTPGRLLDH LRRQTLKVDQ VDMVILDEAD EMLDMGFIED IEEIIRHTPA
ERQTLLFSAT MPQEIIRLAQ QYMTDPKYVT VSKTNLTVPQ IEQVFYEAPE KNKLEALCRI
LDISDISQGI LFCRTKRGVD ELVAGLQARG FAAAALHGDL SQQQRNTVMR QFRSSEVELL
VATDVAARGL DIEGVSHVIN YDIPQDPEFY VHRIGRTGRA GRSGVAITII SPREYRQLRQ
IENITKTHIK RQKLPSIADV VERQKESIKE RLIQIINEGK LGYYRSVVDA LVDEYDPMDI
AAAALKLSMD LEPNSEDVNL NTVNFGNTGA RPGMVRLFLT LGRKDRVTPP EIIKLVSDES
GISGGQIGNI NIYENFSFVE VPEDWANCVI SCLHRQHFKG RRIFVEPARA RK