| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1901 |
|---|
| Symbol | |
|---|
| ID | 4957952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2089550 |
|---|
| End bp | 2090086 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640181071 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001113247 |
|---|
| Protein GI | 134299751 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGATT TAGTGGAAAC AACCATAGCC TCAAAGCTGG TCTATGAAGG AAAAATTCTC
AATCTACGGG TGGATCAAGT AACTCTGCCA AATGGTAGGG AAGGCAGCCG GGAAGTTGTG
GAGTTTTCCC AGGCGGTGGC TGTGGTGGCC GTGAAGGAAG ACAATAAAGT TTTACTTGTT
AAACAATATC GTTATCCAGT GGGGGAAGTA CTGATGGAAT TACCTGCTGG GAAGATGGAT
CAAGATGAAA ATCCGGAACA ATGTGCCCTC CGGGAATTGC AGGAAGAAAC TGGTTATAAG
CCTAGATCCA TTCAAAAAAT CTGTGATTTT TATACAACGC CTGGTTTTTC TTCTGAACGA
ATGCATCTAT TTTTGGCTAC AGGACTTACT GAAGGGGAGC AAAGCCCCGA TGAAGATGAA
TTTGTAAAAG TTGAAGAGGT TCCCTTTGAT CAAGCTATTC AGATGATATT TGAGGGGAAA
ATCCAGGATG GCAAAACCAT TGCAGGCCTC CTAGCGGTTG AAAAGAAATA TAGATAG
|
|---|
| Protein sequence | MKDLVETTIA SKLVYEGKIL NLRVDQVTLP NGREGSREVV EFSQAVAVVA VKEDNKVLLV
KQYRYPVGEV LMELPAGKMD QDENPEQCAL RELQEETGYK PRSIQKICDF YTTPGFSSER
MHLFLATGLT EGEQSPDEDE FVKVEEVPFD QAIQMIFEGK IQDGKTIAGL LAVEKKYR
|
|---|
| |