Gene Dred_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1886 
Symbol 
ID4958463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2071064 
End bp2072746 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content48% 
IMG OID640181057 
Producthydantoinase/oxoprolinase 
Protein accessionYP_001113233 
Protein GI134299737 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATCG GTATAGATGT TGGCGGCACA TGCACCGATG CTGTGTTGCT GGATGGCGGT 
GCTGTTTGTG CAACTGCCAA GGTGGAAACC CAGGATGACT TATTAATTTC CCTGGGAGAT
GCACTGGATA ACCTGCTAAA GGGAATACCC AGTCATAAGA TAGAAAGAGT TGTCTTTAGT
ACAACTCTGG TTACAAATTT AATTGCAGAA AAGAAATATG ACCCGGTTGG GGTCGTCATA
ATGCCTGGGC CCGGCAGAAC TTTTTCAGAC TTACGGGATC AGGACGATGT GTTTTGTTTA
AATGGGGCCA TTGATTATCG CGGAAGAGAG ATCATACCAT TGCAACCTTC CCAAATGGAG
GAGGTTCTTG CCTGGTTGGA AGCCAAGGGT TATAACAAGG TGGCTGTGAT CGGAAAGTTT
TCCACTAGAA ACAATAGCCA CGAAGTAAAG GTCGCTGACT TCATAAACAA ACATCATCCA
GACTGGCAGG TAGAAATGGG ACATAGGGCT GGGGGAAAAC TAAACTTTCC TCGGCGCATA
GCCAATACGG TTCTAACCTG TGCAACCCGC CAGAAGTATC GTTATTTTAC TAAGGCTGTA
AGGGATGCTA TGGCGCGTAG AAATATAACG GCAACTGTTT TTATCTTAAA AGCGGATGGG
GGAACACTAC CTCTTAGCGC TTCGGAAGAA GTTCCGGTAG AAACCATTTT TTCCGGACCT
GCTGCCAGTA CCCTAGGCGT ACAAGCCTTA ACACCGCCGG GGGAAACCTC TTTGGTGGTG
GATATTGGAG GGACCACCAC GGATTTAGCT TTAGTTTTAT CAGGTAATCC TTTGTTGGCT
TCCAAGGGGG CAAAGATCGG AGAACGTTAT ACACAGGTCA GAGCTTTAGC AGTGCATTCA
GTTCCAGTGG GTGGGGATAG CGTTGTAGAA AGGGTAGGAA AAGAGTTTAT TATTTACTCA
GAAAGAATGG GTCCTGCCTA TTGCTTGGGG GGGCCCATGC CTACACCAAC GGATGCCTTA
CGGGTCATGG GAATTAGCCA AATTGGTGAT GAGGATAGAG CCCACGAGGC AATGACTATC
CTGGGAGCTC CCTTGGGCAT GGGTGTCAGG GAAGTTGCCC AGGCCATTGT AAATTTGGTT
ATTGACATGG TGGTTGTTGA AATAGAGCGA ATGTATATGG AGTGGGAGCA AGAACCGGCT
TACCGTGTAT GGGAGGTTAT ACAAAAGTGC AAAGTGCGCC CGCAAAATGT TGTGGGGGTA
GGGGGAGGAG CCGCTGGTTT TGTTCCTCAA ATCGCTGCAA GATTAGGATG TACCCCTATA
TTGCCTCCCC ATGCCCCGGT GGCCAATGCC ATCGGAGCAG CGGTTGCCCG GCCTACCTTA
CAAGTAAATC TAATGGCCGA TACAGAGCGG CAGATTTACA TTGTGGAGGA GGAGGGGTAC
CAGGGCCAAT TAGCCGGCAA ACTGGATGAA CTCTCTGCCG TTGAACTGAC AAAATCCTGG
TTGTTAAAAC GGGCTGAGAA AATGAATTTG CGTAGTTATG TTGATGAAAT AGAAATAATC
AATCAGGATG TTTTTAATGT GGTTCGAGAT TGGCAAACCA CTGGCAGATT ATTTCACATT
TCGGTGCAAA CACCCAGGGG GATTCTGGCT CATATCGGAA CCGGGGGGAG GTTTTTACCA
TGA
 
Protein sequence
MLIGIDVGGT CTDAVLLDGG AVCATAKVET QDDLLISLGD ALDNLLKGIP SHKIERVVFS 
TTLVTNLIAE KKYDPVGVVI MPGPGRTFSD LRDQDDVFCL NGAIDYRGRE IIPLQPSQME
EVLAWLEAKG YNKVAVIGKF STRNNSHEVK VADFINKHHP DWQVEMGHRA GGKLNFPRRI
ANTVLTCATR QKYRYFTKAV RDAMARRNIT ATVFILKADG GTLPLSASEE VPVETIFSGP
AASTLGVQAL TPPGETSLVV DIGGTTTDLA LVLSGNPLLA SKGAKIGERY TQVRALAVHS
VPVGGDSVVE RVGKEFIIYS ERMGPAYCLG GPMPTPTDAL RVMGISQIGD EDRAHEAMTI
LGAPLGMGVR EVAQAIVNLV IDMVVVEIER MYMEWEQEPA YRVWEVIQKC KVRPQNVVGV
GGGAAGFVPQ IAARLGCTPI LPPHAPVANA IGAAVARPTL QVNLMADTER QIYIVEEEGY
QGQLAGKLDE LSAVELTKSW LLKRAEKMNL RSYVDEIEII NQDVFNVVRD WQTTGRLFHI
SVQTPRGILA HIGTGGRFLP