Gene Dred_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1882 
Symbol 
ID4958205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2066041 
End bp2066892 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content43% 
IMG OID640181053 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001113229 
Protein GI134299733 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTCTG CTGACTCCAT GTTAGTTTAT CGTGACATGG ACATTGGAAC GGCTAAACCC 
ACCCTTGAAG AGATGGCAGG CATTCCCCAC CATATGATTG ACATTGTTAA CCCTAATGAA
GAATTCAGTG TAGCCACGTA TCAAAGTAGA GTGGAGGAAC TCATTAACCA AATTATTGAT
CGTGGCAATT TGCCTCTCCT GGTGGGTGGT ACGGGGCTTT ATATTCGATC TGTAATTGAT
CACTATGATT TTACCACAGC ACCGAAGGAT GATCGGTTGA GAGAGTGTCT TAAGCGTGAA
GCAGAACAAG TGGGGGCGGC AGCCATGCAT AAAAAATTAT CTGAGGTTGA TCCACAATCA
GCTGAACGCC TGCACCCCAA TGACCTGAGA CGGGTCATCC GGGCTTTGGA GGTTTATTAT
CAAACCGGGA AAACAATTGC GGAATACCAG TATAAAGATC AAGTAGAGAA GCCGAAATAT
AACTTAAAAA TGTTTGGGTT AACGATGGAT CGGCAATTAC TATACCAAAG GATTGAACAG
CGGGTCGATC TGATGATGGC AAGAGGGTTG CTGACTGAGG TAAAGGAATT GGTGGAGCAA
TACAATGGCC TGGGAACTGC ATTACAAGGG CTGGGTTATA AAGAAATTAT CGGCTACTTA
AAGGGAGAGT ATTCTTTGCC GGAGGCCGTA GAGATTCTTA AACGAAATAC TAGACGTTTT
GCCAAACGCC AACTTACGTG GTTTCGAGCT GATAATAGAA TTTTTTGGAT TGAAATGGAT
CGTTTTGAAA ATAAAAAGGC TGTTGCGAAT GAAATTATGA AGCAAATGGC AGGAGATTTT
TTAACTTTGT AG
 
Protein sequence
MISADSMLVY RDMDIGTAKP TLEEMAGIPH HMIDIVNPNE EFSVATYQSR VEELINQIID 
RGNLPLLVGG TGLYIRSVID HYDFTTAPKD DRLRECLKRE AEQVGAAAMH KKLSEVDPQS
AERLHPNDLR RVIRALEVYY QTGKTIAEYQ YKDQVEKPKY NLKMFGLTMD RQLLYQRIEQ
RVDLMMARGL LTEVKELVEQ YNGLGTALQG LGYKEIIGYL KGEYSLPEAV EILKRNTRRF
AKRQLTWFRA DNRIFWIEMD RFENKKAVAN EIMKQMAGDF LTL