| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1873 |
|---|
| Symbol | |
|---|
| ID | 4958491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2059033 |
|---|
| End bp | 2059677 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640181046 |
|---|
| Product | SOS-response transcriptional repressor, LexA |
|---|
| Protein accession | YP_001113222 |
|---|
| Protein GI | 134299726 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.164237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAACG CCCGAGAAGA AGAAGTTTTA AATGTAATCA TAGAAAACGT AAAGCTGAAG
GGTTATCCTC CATCAGTTAG AGAAATAGGC GAAGCTGTGG GTCTTTCATC TAGTTCTACT
GTTCATTCTT ATTTAAAAAG GTTGGAGCAA AAAGGTTATC TAAGGAGAGA TCCAACAAAG
CCCCGGGCCA TTGAAGTGAT TATGTCGGAG TTGTCGAAAA ATCCTTCCAG TCACCCCCTA
ACTTCAGAGC TTTCAAGATA TTCTGACGAG GAATTAATTA GTATACCTTT ATTGGGAGAA
GTAGCGGCAG GCGTTCCTCT CCTGGCGGTG GAAAACTATG ATGAAAAAGT AACCCTGCCC
AGGAGTTTTA CTGGTTACGG GGAATTCTTT ATGCTATCCG TGCGCGGCGA CAGTATGATC
GAAGCGGGTA TTTTGCCCGG AGATCTTGTC CTGGTGCGTA GACAAGAATC GGTAAGCAAT
GGGGATATTG CCGTAGCCCT CCTGGAAGAT GAAGCCACGG TGAAAAGATT TTATAAAGAG
AAAAACAGAA TAAGGTTACA GCCTGAAAAC AGTTTGTTAT CACCTATCTA TGTTCAGGAA
GTCAAAATAC TTGGCAAAGT GGTTGGATTA ATGAGAAAAA TATAA
|
|---|
| Protein sequence | MLNAREEEVL NVIIENVKLK GYPPSVREIG EAVGLSSSST VHSYLKRLEQ KGYLRRDPTK
PRAIEVIMSE LSKNPSSHPL TSELSRYSDE ELISIPLLGE VAAGVPLLAV ENYDEKVTLP
RSFTGYGEFF MLSVRGDSMI EAGILPGDLV LVRRQESVSN GDIAVALLED EATVKRFYKE
KNRIRLQPEN SLLSPIYVQE VKILGKVVGL MRKI
|
|---|
| |