Gene Dred_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1866 
Symbol 
ID4955415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2051532 
End bp2052656 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content41% 
IMG OID640181039 
Producthypothetical protein 
Protein accessionYP_001113215 
Protein GI134299719 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0464995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAACA AAACCTCTGA TATTGTCAAA ACATTGCCCG GTATATTCTT AATGTTTACC 
ATTGCGGTAA TTGCTATGGG TGGAGAAGAT CTTGGTATTC CCTGGCAAGG GTTGGAAACA
TACTTTAAAA CAAATCCTTA TATAACTAAT ACATTTATAA AGGCTGTACC TTTGAATTAC
ATCCTTTTAT GTATTCTATT GGGAATTATC ATCGGGAACT TGATCAATAT CCCTAAGTGG
ATCATGGCAG GAGTGACAAC ATCTCGCCTG TTTATCAAAG TAGGGGTTAT TTTACTGGGT
TCACTTTATA GTTTTAGGGA TGTGGCCCAA TTGGGAGGAA CGGCCATATT TCTTGTTCTA
ACCTTTGTTA TCATGACCCT AACTGTTACA TTATGGCTGG GCAAAAGAGC CAATATGGAT
CCTGCCTCAG CTGCCGTTTT AGCCGCAGGG ACATCTGTTT GTGGGGTGTC TGCCATTGTA
GCTACAGCCC CTGCAGTGAG GGCGAGGACT ACGGATGTTG TCTTTTCTAT TGCAACAATT
CTTAGCTTTG GTGTTGTTTC TATTTTTTTA TTTCCTGTCG TTGGCAAGCT GTTAAATTTA
AGCGCTCATC AGTTTGGCGT ATGGTCAGGA ACAGGAATAC TAAGTTCTGG CCAAGTTTTG
GCAGTGTGTC TAATCTTTGA CCCGGGGACG GCCCATCATG CCTCAGTAAG TTTAAAGACT
GGGGAAATTT ATAACTTGGC ACGAGTCCTT TTCTTACCCT TCGTTGTACT TGCTTTAGCA
GCAATGACCA GTCGTTCAGT TGAATTATTG GATGATCACA TAACCATTCA TACCGGACTG
TGGAGTAAAT TCCCACTGTT TGTTTTGGGT TTTTTAATTA TGGTCTTTCT TACTTCCTTC
GGCCTGTTGG GGCAGGTATC ACCACCATCG CCGGAGTTAA TAACCATCCG TAAATTGTAT
AACTGGTTTT TTGCCATTGG CTTGACTGGC TTAGGCATGC AAATATCCTT TTCTGAGTTA
AAAAAAGCAG GAGGAAAGCC ATTAATAGTA GGGTCTTTAG CTGCCCTGCT AAAGGCCATA
CTGGCACTTG CTTTTGTTCT AATGTTTATT CCAGAGAAAC CTTAG
 
Protein sequence
MSNKTSDIVK TLPGIFLMFT IAVIAMGGED LGIPWQGLET YFKTNPYITN TFIKAVPLNY 
ILLCILLGII IGNLINIPKW IMAGVTTSRL FIKVGVILLG SLYSFRDVAQ LGGTAIFLVL
TFVIMTLTVT LWLGKRANMD PASAAVLAAG TSVCGVSAIV ATAPAVRART TDVVFSIATI
LSFGVVSIFL FPVVGKLLNL SAHQFGVWSG TGILSSGQVL AVCLIFDPGT AHHASVSLKT
GEIYNLARVL FLPFVVLALA AMTSRSVELL DDHITIHTGL WSKFPLFVLG FLIMVFLTSF
GLLGQVSPPS PELITIRKLY NWFFAIGLTG LGMQISFSEL KKAGGKPLIV GSLAALLKAI
LALAFVLMFI PEKP