| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1859 |
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| Symbol | |
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| ID | 4956012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 2042742 |
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| End bp | 2044553 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640181032 |
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| Product | hypothetical protein |
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| Protein accession | YP_001113208 |
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| Protein GI | 134299712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA AAAATACTGG GGATCAGCAT GTACCCAAGT CATCCCCCAT CCCTATCGGT
TCTGGCTCTG GTATGGCCTG GGTATCATCT GGCAAGATTA TTGTTAGAAA TCCCCAAGAA
GGCGCCAGTA AGGCTACCAT TACCACATGT AAGGAGATTC AGCTTCTTAT CAATAGTCTT
CCTGTCTCTG ATTCCGTTGA AGTATCCCAG GAAGACCATC TAGAAACCAT ACCTTTGAGC
TATACCGACC AAGGGTTTAT TAAAGTTCAG CTTTCTCCTG ATAGGATGTC CGCTTTCCTT
GAGATCAAAA ATGAATGTTT GAAAAGTTAC GAACTAATTG ATTGTCCTCC AAGTACAAAC
TTAGTGCTCC AGGCCCGTCA GACAAAACAA CGTATTTTTC GAGAAACTAA GGATACAATT
ATAAATCTAT TAAATCAAAA TCATATTTCA TTCGGCATTG ATCTCCAAGC CCTAGAAGAT
ATCATAACTC AACAGTTAGA AGGGCTTCTA TTGGTGGCCC AAGGTCTGGC CCCTGGTGAA
ACTATTGATG ATGATGTAGA ACTCCTATTT GAGCATAAAA TTGACTCAGA CTTATCAAAT
GCACTGGATA CTATCGATTT TAAAGAAATG CATAGTATTC CTTCTGTAAA CGCAGGGGAA
ACACTGGCCC AAAAAATAAT TGGTAAAGAA GGAACTCCAG GAACTACGGT AACGAATCAG
ATCTATAAGG CCCGGGAAGC CAAAAGAATA ACCCTCCTTG CCGGACCTGG TGTGGAGATC
GTAGACAATG GTTTAAGGGC AATCGCTAAT ATTGAAGGTC TTCCACGTGT TCAAAAATCC
CATAATAACT GGACTATCTC CGTTGACCCC GTTTTAAATT TGTCCGGCGA CGTGGATGTT
AAAACAGGTA ACATCCGGTT TAAAGGCAAT GTTAACATAA TGGGTTCAGT GGAAACTGAT
ATGAATGTAA GTGCCAGTGG CAATATTACC ATTTCCAACA TTGTTACCAG GTGTAAAATT
ACCGCTGGTG GCAATGTAAC CATCAAGGGA AATATTGTTA ATTCAGAAAT TATCAGTGGT
GGTTTTATTG TCATATGCAA TGCCATCAAG CCACTTCTCT CTGAATTATT AAAAACCCTT
GAGGACCTCC TAATCTCAGC TAACTTGATG TTAGAGAAAC TGCCTACTAA CAATAAGATT
CTCTTTGGCA ATATTCTCAT GTTACTCATT GAAAAGAAAT TCACCAATTT TGGCACAATT
ATTGATAAGG TAAGTAAAAA GCTAAAGGAA GTGGATTTAA AACTACTGGG AACCTACGGA
ACACTATTAG AAAAAGCATT AGTAAACCTT ACCGGCATAA ATATTTTAAA TTTTAAAAGT
TCTCTGGAAT ATCAAGCCCT GCTAACAGAT TTAAATAACT TCTACTACTA TATTGAGAGT
CAGGTGACAA GCCGTAGTGA AATCCATATT AAGGTTGCCC TGAATTCAGT CATCAAGAGC
TCTGGTGATG TTATAGTAAC CGGTGGCTGT TTTAACACCC ATATCCTAGC TGAGGGTAGT
GTACACATCG ACGGTATTGT ACGAGGAGGT ATCATACAGG CCCATGATGA TATTTTTATT
CAACAAATCG GATCAGAAAT GGGCACAAAG TCTGTGGTTA TTGGATCCAA AGATAAAAAA
ATAAAAATTA ATCAAGCCTT CGATGGTGTT ACGATAAAAA TAGGAAATAT GAGTAGAATT
ATTGATCGAA CCATGAAGAA TATCGTGGTT CTTCTTGACG AGGACGGTTA CTTACAAATC
AATTCCTTTT AG
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| Protein sequence | MKAKNTGDQH VPKSSPIPIG SGSGMAWVSS GKIIVRNPQE GASKATITTC KEIQLLINSL
PVSDSVEVSQ EDHLETIPLS YTDQGFIKVQ LSPDRMSAFL EIKNECLKSY ELIDCPPSTN
LVLQARQTKQ RIFRETKDTI INLLNQNHIS FGIDLQALED IITQQLEGLL LVAQGLAPGE
TIDDDVELLF EHKIDSDLSN ALDTIDFKEM HSIPSVNAGE TLAQKIIGKE GTPGTTVTNQ
IYKAREAKRI TLLAGPGVEI VDNGLRAIAN IEGLPRVQKS HNNWTISVDP VLNLSGDVDV
KTGNIRFKGN VNIMGSVETD MNVSASGNIT ISNIVTRCKI TAGGNVTIKG NIVNSEIISG
GFIVICNAIK PLLSELLKTL EDLLISANLM LEKLPTNNKI LFGNILMLLI EKKFTNFGTI
IDKVSKKLKE VDLKLLGTYG TLLEKALVNL TGINILNFKS SLEYQALLTD LNNFYYYIES
QVTSRSEIHI KVALNSVIKS SGDVIVTGGC FNTHILAEGS VHIDGIVRGG IIQAHDDIFI
QQIGSEMGTK SVVIGSKDKK IKINQAFDGV TIKIGNMSRI IDRTMKNIVV LLDEDGYLQI
NSF
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