Gene Dred_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1812 
Symbol 
ID4957372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1985130 
End bp1986686 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content41% 
IMG OID640180986 
ProductABC transporter related 
Protein accessionYP_001113162 
Protein GI134299666 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TAACTGTAGA AAATGTAACA CATGGATTTG GCGGCAGAAC CATTCTAGAG 
GATGCATCCT TTCGTCTTTT AAAAGGGGAG CATGTTGGCT TGGTTGGGGC CAACGGAGAA
GGAAAGTCAA CCTTCCTAAA TATTATTACC GGCGAACTAA CTCCCGACCA AGGGAAAGTG
GAGTGGTCAA ATCGTGTTAC AGTTGGTTAC TTAGATCAAC ATACAATATT AACCAGAGGC
AAAACCATTC GTGAAGTTTT ACGGGAAGCC TTTCGGAGCA TGTTTGATCT GGAAGCGGAA
ATGCTTAAAA TATATGAGAA AATGGGTGAA GCATCCACAT CAGAAGTAAA CCAGATGATG
GAAGATGTAG GAGACATCCA GAATATACTT GAGCATAATG GTTTCTATAC CATCGATGCG
AAAATCGAAG AAATTAGTAA TGGTTTAGGA TTGTCAGATA TTGGTTTGGA TAAAGATGTT
AGTGATTTGA GTGGTGGACA AAGAACCAAA GTTCTTCTAA CAAAATTGCT CCTACAGAAT
CCTGCCATTT TAATTTTGGA CGAACCAACA AATTACTTGG ACTTTGAACA TGTTGAATGG
CTCAAGAGGT ACCTCATAAA CTACGAAAAT GCCTTTATAC TTGTTTCCCA CGATGTGCCT
TTTATGAATG ATGTGGTCAA TGTTATTTAT CACGTGGAAA ACAGTTTACT TACAAGATAC
ACCGGAACTT ACATTCAATT CCTACAGGCC CATGAATTAA AGAAACAGCA AGAACGCAAG
GCCTACGAAA AGCAGCAAAA GGAAGTAGAA AGATTAGAGG ATTTTATTGC CCGAAACAAA
GCTAGGATTT CAACCACCGG TCGGGCCAAA AGTCGCCAGA AGCAATTGGA AAAGATGGAT
ATTCTTGAAA AACCCAAAGA AAAAATAAAG CCAACCTTTC GGTTTACAGA AGCCAGGACT
CCAGGTAGAA TTATTTTTGA GGCAATAGAC CTCGTTTTAG GGTATGCCGA ACCCTTAACT
CAACCCCTTA ACATTACCTT AGAAAGAAAC CAGAAGGTAG CCATCCGTGG GGTGAACGGA
TTAGGGAAAT CTACTCTGTT AAAAACCTTG ATGGGTGTTA TCAAGCCCTA TAACGGATAT
GTAAAATTAG GCGAGAGTAT CTACCCGGGG TATTTCGAAC AAGAAAGCAG CAGAGACAAC
GATAACACCG CCATGGAAGA AATCTGGAAT GATTATCCAG GCCTTAGCAA CTACGAAGTT
CGGCAGGCCC TTGCCAAATG TGGTTTAACA AACGAACATA TCACCAGCCA AATGATGGTA
TTAAGCGGTG GAGAAAATGC AAAGGTTCGG CTGTGCAAAC TTATGCTCAA AGACGTAAAC
TGGTTGATAC TGGATGAACC GACCAACCAC CTGGATGTTG ACGCAAAGGA CGAATTGAAA
AGGGCTCTGA AGGAGTTTAA AGGAACCGTT GTTTTAGTTT CTCACGAACC AGAATTCTAT
GAAGAATGGG TAACGGATAT ATGGAACCTT GAGGATTGGA CAACTAAAAT CGTCTAG
 
Protein sequence
MSLLTVENVT HGFGGRTILE DASFRLLKGE HVGLVGANGE GKSTFLNIIT GELTPDQGKV 
EWSNRVTVGY LDQHTILTRG KTIREVLREA FRSMFDLEAE MLKIYEKMGE ASTSEVNQMM
EDVGDIQNIL EHNGFYTIDA KIEEISNGLG LSDIGLDKDV SDLSGGQRTK VLLTKLLLQN
PAILILDEPT NYLDFEHVEW LKRYLINYEN AFILVSHDVP FMNDVVNVIY HVENSLLTRY
TGTYIQFLQA HELKKQQERK AYEKQQKEVE RLEDFIARNK ARISTTGRAK SRQKQLEKMD
ILEKPKEKIK PTFRFTEART PGRIIFEAID LVLGYAEPLT QPLNITLERN QKVAIRGVNG
LGKSTLLKTL MGVIKPYNGY VKLGESIYPG YFEQESSRDN DNTAMEEIWN DYPGLSNYEV
RQALAKCGLT NEHITSQMMV LSGGENAKVR LCKLMLKDVN WLILDEPTNH LDVDAKDELK
RALKEFKGTV VLVSHEPEFY EEWVTDIWNL EDWTTKIV