| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1803 |
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| Symbol | |
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| ID | 4958552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1977416 |
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| End bp | 1979542 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640180977 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001113153 |
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| Protein GI | 134299657 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCAGG AATCATTGAA TAAAGAGCAA AGGACAAAAA AGCATAAATA TTTTCTCGTT
TCTGCAGTTG CATTTCTAGT CCTACTTTGT TCCTTATCCA TTTGGACAGT GCTGAAATAC
AATCGGGTAT CAAACCAGTA TGGCCTGGAT TCTTTTCAAT ATAAAAAAAG TCAGAGAAGC
GTTATTTACT CGGCCGACGG GGTTGTGCTG ACTTATCTTT ATCACCAAAA TAGAGACTAT
GTATCAATAG ACCAGATTTC ACAGCCAATG CAACAGGCCA TTATTGCCAT AGAAGACCAC
CGATTCCATG AGCATTTTGG GATTGATGTC ATCGGTACCA CAAGGGCACT CTACATAGAT
TTAATTTCTG GAGAGGCCCT TGAAGGCGGC AGCACCATTA CCCAGCAATT AGTTCGAAAT
TTATTCTTAT CATCAGAAAA AACACTCTCA AGAAAGATAA CTGAAATGTT TCTTGCCATT
AAAATGGAGG ATCGATTTAC CAAGGAAGAA ATTTTGGAAA TGTACTTAAA TGAAATTTAT
TTTGGCAACG GATGCTATGG CATAGAAACA GCAGCATTAA AATATTTTGG CAAACATGCC
AGCGAACTAA GTTTGCTGGA AGCCACAATG CTGGCAGGTA TCCCCCAAGC ACCTAGTAAA
TTAGATCCTA TATATCATGC CCCAGAGAAC CGGGCCCGCC AAAAGGATAC ACTGAAGAGA
ATGGTAGAAT TATCATACAT CACCAAGGAA GAGGCACATA ACATACTCCA AAAAGAGATT
TCCATTAAAA AACCAGATCG AAATGAAACC AGCACAGATT ATAAATTCCC CTATTTTACC
ACCGAGGTTA TCCGACAACT TGTTGATCGA TATGGCAAGG AAAAAGTGTA CAACGGTGGA
TTAAAGATTG TTACAACCCT AGACTCCCGT GCCGCTGCCA TAGCAGAAGA ACTGGCTCGA
AAAAAAATAA AACAATTTAA AGAATCAGGG ATTTCCGCCT ATAATATTTC TATTGTCTCA
ATTAACAACC AAGACGGGGC CGTAATTTCC TTGGTGGGTG GCAGTGATTT TAATCGTGAC
CAGAATAATT TAGCGATCAT CCCCAGACAG CCTGGTTCAG CCATCAAACC CCTTCATTAC
GCAGGGGCCC TTGACAAAGG TATCATAAAC GAAAATGCCC TTCTAAATGC CAGTTCAAGA
AGTTTTGGTA AATATTATGT CTCTTCCAAT GTAAAGGCCA ACGTTTCAGT TTGTGTGGCA
CTGAAAAATT CTATGAACGT GCCGTCAGTT GAAGTGGTAA ATGCCCTTGG CATTCAAAAA
ACCATAGAAA ACTTAAAAAG GTTTGGTATC ACTACCATCA GCCAAAATGA CTACAATCTG
GCCATTGCCC TGGGAGGTAT GTATAACGGC ATTAAGCCCC TGGAGCTAGC CGCTGCCTAT
ACAACATTCG CCCATGCAGG CATTTACAAT AAACCATACA TGATAAAAAC TGTGGAAGAA
GAGAATGGAA GTATTCTTTA TCGTCACCAA CCAGAAAACA AACAAATTAT TTCTCCTCGA
ACAGCCCAGT TAATAACCCA AATGCTTGTG GAGGTGGTTC GGGGCGGCAC CGGAACCAGA
GCGAATATAT CTGGTAACGA GGCAGGAAAA ACAGGCACTA CCAATGATAG CCGTTGTTTA
TGGTTTGTGG GATTTAATCA AGATGTATCC ACTGCAGTTT GGATTGGTAA TAGTAACAAT
CAGCCGGTTT ATGGCTTCCA TGGCGGAGAC CTGGCGGCAC CTATATGGCG AGAATACACC
GCCACATTAA TCCAAAAACA AATTATTCAT AAATCAGTTC GAATCTATCA GACAGTATTA
CCCATTAAAC AAGTCTATGT TGAGCAGAAT ATTGAGAAAG ATGAGCCGAT GGAGGGCGAA
AAGGGTAATA AAGCAGAAGA TAACCAAACA AATGCGGGCA ATGATACCCA AACCGATGAA
AATAGTCAAA ATACGCCCCC AAACAATAAT GAAAATACAA CTCCAGTTCA ACCAGAGAAC
CAGGCACCTC TACCTGTAAG TTCCCCCACA GAAACCCCTG CAGTTCTGGA CCAAGCAACA
AGCAACACCG GCCTAGGGAC TACTTAA
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| Protein sequence | MEQESLNKEQ RTKKHKYFLV SAVAFLVLLC SLSIWTVLKY NRVSNQYGLD SFQYKKSQRS
VIYSADGVVL TYLYHQNRDY VSIDQISQPM QQAIIAIEDH RFHEHFGIDV IGTTRALYID
LISGEALEGG STITQQLVRN LFLSSEKTLS RKITEMFLAI KMEDRFTKEE ILEMYLNEIY
FGNGCYGIET AALKYFGKHA SELSLLEATM LAGIPQAPSK LDPIYHAPEN RARQKDTLKR
MVELSYITKE EAHNILQKEI SIKKPDRNET STDYKFPYFT TEVIRQLVDR YGKEKVYNGG
LKIVTTLDSR AAAIAEELAR KKIKQFKESG ISAYNISIVS INNQDGAVIS LVGGSDFNRD
QNNLAIIPRQ PGSAIKPLHY AGALDKGIIN ENALLNASSR SFGKYYVSSN VKANVSVCVA
LKNSMNVPSV EVVNALGIQK TIENLKRFGI TTISQNDYNL AIALGGMYNG IKPLELAAAY
TTFAHAGIYN KPYMIKTVEE ENGSILYRHQ PENKQIISPR TAQLITQMLV EVVRGGTGTR
ANISGNEAGK TGTTNDSRCL WFVGFNQDVS TAVWIGNSNN QPVYGFHGGD LAAPIWREYT
ATLIQKQIIH KSVRIYQTVL PIKQVYVEQN IEKDEPMEGE KGNKAEDNQT NAGNDTQTDE
NSQNTPPNNN ENTTPVQPEN QAPLPVSSPT ETPAVLDQAT SNTGLGTT
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