Gene Dred_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1795 
Symbol 
ID4956920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1967367 
End bp1968608 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content38% 
IMG OID640180969 
Producttransposase, IS4 family protein 
Protein accessionYP_001113145 
Protein GI134299649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGG ATACCAGTAA ATCCACATAT AATCAACTAT TTCAAGCAAT TTATAATGAA 
AAATTTTTAA GCAATGTCAA AGAATCAGAA GTTGATGCTT ACACGAAGAA GTTAACCGTT
GTCAAACTAA TTCAAATGAT TTCCTATGCA CAGTTAGAGC AACTTAAAGG TCTACGCCAT
ATCAGTAACA GCTTGAACAA TGATAATTTT AGATCAGCAG TAGGTTTAGA TTCAATTAGT
GCTTCACAGT TATCCCGTAA ATTAAGAGAG TTATCTCCTG AATTAATTCA GTCTCTGTTT
TCTGATATAG TCCATCAGTT TGGAACCCAA ATCGGTTTTA AATCCATAAG GCATGAATTA
GGTCGTATTT ATCTGATAGA CTCTTCAACC ATAAGCCTTT GTCTTTCCCG ATATAGATGG
GCAGAGTTCA GAAAAACCAA AAGCGGAGTT AAATTACACC TCCGTATCCA ACTGTTTGAA
CAAGGGGTTC TACCAGACAA AGCAATAATT AAACCGGCCA AACCTGCTGA CAAAACACAA
ATGGATGCCT TGGTTGTAGA AGAAGATGCC CTAAACGTTT TTGACCGTGG CTACCTGGAT
TACAAGAAAT TCGACAAATA TTGTAATAAC GGTACCAGAT TTGTTAGTCG TCTAAAGAGT
AATGCAATAG TTGAAACATT AGAGGAATTT CCAACAAACC CAGATAGCTT AATCAAAAAA
GACCAAAAGG TAATCTTAGG CAAAGACGGC ATAACCAAGA TGCAATACCC CTTGCGGCTA
ATAGAAACAG AGGATACCGA AGGTAAGCCT GTAATTATCA TTACCAATGA CTATGAGTTA
AGTGCCGAGG AAATAAGCTA TATATATCGC TACCGCTGGC AAATCGAATT ATTCTTTAAG
TGGATCAAAC AACATCTCTG TGTAAAACAC TTCTATGGTC TAAGCCAGCA GGCTGTGGAA
AACCAATTAC TGATAGCGCT GATTACCTAC TGTTTAATGA TATTGCTTAA AATGAAAACC
GGTTACGAGG GTCCGTTACT AAAAATTAAG ATGTTGCTTA GCACATGCCT TTACATAGAA
TTCTCTGAGT TTGTACGAAA ACTCCAGCTC AAGTCAGGCC AAAGTTCAAG AGGACGACGG
TGTATAGACC ATGAAAAAGT CTACAACATT ACGTTAGTAC AGGTACTACA AGGTGAGGCA
GAACACCTGG ATGATCTAAC TTACGACCCG ATAATAGCTT AG
 
Protein sequence
MDKDTSKSTY NQLFQAIYNE KFLSNVKESE VDAYTKKLTV VKLIQMISYA QLEQLKGLRH 
ISNSLNNDNF RSAVGLDSIS ASQLSRKLRE LSPELIQSLF SDIVHQFGTQ IGFKSIRHEL
GRIYLIDSST ISLCLSRYRW AEFRKTKSGV KLHLRIQLFE QGVLPDKAII KPAKPADKTQ
MDALVVEEDA LNVFDRGYLD YKKFDKYCNN GTRFVSRLKS NAIVETLEEF PTNPDSLIKK
DQKVILGKDG ITKMQYPLRL IETEDTEGKP VIIITNDYEL SAEEISYIYR YRWQIELFFK
WIKQHLCVKH FYGLSQQAVE NQLLIALITY CLMILLKMKT GYEGPLLKIK MLLSTCLYIE
FSEFVRKLQL KSGQSSRGRR CIDHEKVYNI TLVQVLQGEA EHLDDLTYDP IIA