Gene Dred_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1791 
Symbol 
ID4956650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1962838 
End bp1963647 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content43% 
IMG OID640180964 
ProductBaf family transcriptional activator 
Protein accessionYP_001113141 
Protein GI134299645 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCTAG CAGTGGACAT AGGAAATACC AATATTGTTT TTGGAGTCTT GGATGATAAA 
TCCTTGTATG CCAACTGGCG ACTGGCCACT GACCGTAACC GGACAGCCGA TGAATATGGC
GTTTTGTTAA CGGAACTCTT TTGTTTATCT AATATTAATA TGAAAGAAGT GAAGGGGATT
ATCATCTCTT CAGTGGTTCC TCCCCTCAAT CCCATACTGG AATTCATGTC TGAAAAATAT
TTTAATATCT CACCCATACA GGTGGGTCCT GGTATTCGTA GTGGTTTGCA TATTAAAATG
GACAACCCCC GGGAAGTAGG AGCTGACCGT ATTGTTAACG CAGTGGCAGC CTATTCCCTA
TATGGTGGTC CGTTGATTAT TGTGGATTTT GGTACAGCCA CCACTTTCTG CTGTGTAACT
GCCAAGGGGG AATACCTGGG GGGAGCCATA GCTCCGGGAA TTGGAATTTC TACCGAAGCA
TTATACACAA AAGCATCAAA ACTGCCACGT GTGGAATTAT CCAAGCCTAG CTCTATCATT
GGTAAAAACA CCATAACTGC CATGCAAGCT GGCATTATTT ATGGCTTTGC AGGTCAAGTT
GAATTCATTG TAAGACGTAT GAAAAAGGAA ATGAGCACCG AGACTCAAGT CATTGCCACC
GGAGGACTAG CGGAGGTTAT GAGTCAAGAA ACCTCGGTCA TTGACAAAGT AAATCCAATT
TTAACACTAC AGGGACTGAA AATCATATAC GATCGTAATC AACCGCATAT TGGAACAGGG
TACCATCTTA TTGCGGATCG GTCTCGTTAG
 
Protein sequence
MILAVDIGNT NIVFGVLDDK SLYANWRLAT DRNRTADEYG VLLTELFCLS NINMKEVKGI 
IISSVVPPLN PILEFMSEKY FNISPIQVGP GIRSGLHIKM DNPREVGADR IVNAVAAYSL
YGGPLIIVDF GTATTFCCVT AKGEYLGGAI APGIGISTEA LYTKASKLPR VELSKPSSII
GKNTITAMQA GIIYGFAGQV EFIVRRMKKE MSTETQVIAT GGLAEVMSQE TSVIDKVNPI
LTLQGLKIIY DRNQPHIGTG YHLIADRSR