Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1788 |
Symbol | panB |
ID | 4956518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1960573 |
End bp | 1961406 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640180961 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001113138 |
Protein GI | 134299642 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA GGGTAACCAC TGCAGACTTC CGGCGTATGA AACAGGAGGG CAAATCCATA GCCATGTTAA CGGCCTACGA TTATTCAATG GCTACACTGG TTGACGCTTC CGGGATTGAT GCTATCCTAG TGGGGGATTC CCTCGGCAAT GTGGTTTTGG GGTACGATTC TACTGTGCCT GTTAACATGG ATGATATGAT CCATCACCTC AGAGCTGTCA CTAGAGGGGT TAAAAGAGCT ATGGTTGTCG GCGACATGCC CTTTTTGTCT TATCATATTT CCCGGGAAGA AAGTGTACGT AATGCAGGAC GTCTAATGCA AGAGGGATTA GCCCATGCTG TAAAGTTAGA AGGTGGCTGC GAAGTGGCCG ATACCGTAAA GGCTATCACA GATGCAGGTA TCCCAGTAAT GGGGCATTTA GGTCTAACGC CTCAGTCAGT TCACCAATTG GGCGGCTTTA AAGTACAGGG GAAGGACAGC GAAGCAGCCA AACGATTATT GGAAGATGCC AAACGACTTG AGCAGGCGGG TGTTTTTGCC ATTGTACTGG AGTGCATCCC TCAGCAGTTG GCCAAAGTTA TTACAGAATC TATCTCAGTG CCCACCATTG GCATTGGAGC GGGTGTAGAC TGTGACGGTC AAGTTTTGGT AATTAATGAT CTGCTTGGGA TGTTTTCAAA TTTTACACCT AAATTTGTCA AACAATATGC CAAGTTAAAG GAACAAATTG TAGAGGCCTG TACTAGCTAT GTAGAGGAGG TGAAAACCAA AGCTTTCCCA GGTCCCGAGC ATGTCTTTAA CATGAATGAA GATCAATTAA AAAAACTTTA CTAA
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Protein sequence | MNKRVTTADF RRMKQEGKSI AMLTAYDYSM ATLVDASGID AILVGDSLGN VVLGYDSTVP VNMDDMIHHL RAVTRGVKRA MVVGDMPFLS YHISREESVR NAGRLMQEGL AHAVKLEGGC EVADTVKAIT DAGIPVMGHL GLTPQSVHQL GGFKVQGKDS EAAKRLLEDA KRLEQAGVFA IVLECIPQQL AKVITESISV PTIGIGAGVD CDGQVLVIND LLGMFSNFTP KFVKQYAKLK EQIVEACTSY VEEVKTKAFP GPEHVFNMNE DQLKKLY
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