Gene Dred_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1783 
Symbol 
ID4956312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1953785 
End bp1954945 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content42% 
IMG OID640180956 
Producthypothetical protein 
Protein accessionYP_001113133 
Protein GI134299637 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03290] CoB--CoM heterodisulfide reductase, subunit C 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG CAGCAACCTA TTTTTTAGAA GTCAGAGATG CAATCGTAGA GATGGGTGGC 
GAAAACATCA ACCTTTGTAT GCAATGCGGA ACCTGTGCCG GTACTTGCCC ATGGGGTAGA
CTGGAAGAAA AAAGTCCCTT TAATATTCGT AAAATGATTT ATCAAGGCCG AATGGGCTTA
GAAGGTTATG AAACAGATGA CATCCTATAT GCTTGTACAA CCTGTGGCCA CTGTGTGACT
CGCTGCCCCC GGGGCGTAAA AATTACTGAC GTAGTAAGGG CCATGCGTAG CGTCATCGGT
GAAACAGGTG GTATACCAAA GAACCTTAAA GCTGCTGTGG GAAGTATTAA CAGTCAAGGT
AACCCCTGGT CTCAACCTAG AGAAAAACGC GATACATGGG CCAAGGACCT TGATATCAAT
AAATTTACCC CTGAAACAGA GTATCTTTTA TTTGTCTGTT GTACCTCAGC CTTTGATGGT
AGAAGTCAAA AAATTGCCCG TTCTATCGCT GAACTTCTTA AAAAAGCCGG CGTCAGCTTT
GGTATCATCG GCAATCAGGA ACAGTGTTGT GGTGAGTCCA TACGTAAGAT TGGGGCTGAA
AGCGAGTTTT CAATGCTAGC AGAATCCAAT ATTAAACTTT TTAAAGAAAA TGGTGTAAAA
AAGATCATTA CAACATCACC TCATTGTCTT TCTGCATTTA AAAACGATTA TCCAGAATTT
GGCGGTGAGT TTGAAGTTTT CCATTACACT CAAATACTTG ATGATCTAGT TAAGGAAGGT
AAACTTTCCT TTACCAATGC CAAAAACCAA AAGGTTATTT ACCATGAACC CTGTTACCTT
GGACGCCATA GTCAAATCTT TGAAGCCCCA AGGGAACTAC TATCCCAGGT ACCTGGAGTC
GAAACCATTG AATTTGCAAA GTCCCAGAAG GACAGCCTAT GCTGTGGCGG CGGGGGAGCT
AGGATCTGGA TGGAAACTGA ATCAGGTCAG CGTTTTTCCG ATTTTAAAGT GCAGGAGGCC
TCTGACAAAG AGGCAGATAT TCTGGTTACT GCATGCCCTT ATTGTGTGGT CATGATGGAA
GATAGTGCTA AGACTTTAAA CAAAGATGAG GAAATAAAGA TTATGGATAT CAGTGAAATC
CTCAAAGAAA ATCTTGGCTA A
 
Protein sequence
MSEAATYFLE VRDAIVEMGG ENINLCMQCG TCAGTCPWGR LEEKSPFNIR KMIYQGRMGL 
EGYETDDILY ACTTCGHCVT RCPRGVKITD VVRAMRSVIG ETGGIPKNLK AAVGSINSQG
NPWSQPREKR DTWAKDLDIN KFTPETEYLL FVCCTSAFDG RSQKIARSIA ELLKKAGVSF
GIIGNQEQCC GESIRKIGAE SEFSMLAESN IKLFKENGVK KIITTSPHCL SAFKNDYPEF
GGEFEVFHYT QILDDLVKEG KLSFTNAKNQ KVIYHEPCYL GRHSQIFEAP RELLSQVPGV
ETIEFAKSQK DSLCCGGGGA RIWMETESGQ RFSDFKVQEA SDKEADILVT ACPYCVVMME
DSAKTLNKDE EIKIMDISEI LKENLG