Gene Dred_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1777 
Symbol 
ID4955900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1945706 
End bp1947742 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content38% 
IMG OID640180950 
Producthypothetical protein 
Protein accessionYP_001113127 
Protein GI134299631 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCCA TAAGATTTAT TTTATTTATT GCATTAATTG CATTTGGTCT GTTTAATATG 
GTGAAAGGTA TTCAAGAACG TTTGAATGCA ACCTATTTAG GTAAGAAAGA TGACCGCATG
GATAATATTG GGGAACGATT GAAAGGTTTG CTAATTTATG CATTAGGTCA AAGAAAAGTT
GTACAAGAAG CCGATGGCGG TATCATGCAT ATTATGATAT TTTTTGGTTC GTCTTTATTT
GGTTTAAGAA TTCTGGAATT TATTTTATCA TCATTAATCC CAGGCATTTT CATTCCGTTT
ATTAGTGATA ACGCAATCTT TTATCTTTTA ACTGACATTT TAGGATTAAT AGCCATTGTG
GGGATTTTGT ATTCCGGTTG GCGACGTTGG GTGCAGAAAG TTGAGCGTCT GGAGCCAGAA
GCTTTTGGTA CTCCTGCAGA AAATCTAATT TTAGCAATGG TTAGTGGACT AACACTAATG
ATTGCTTCTG TTTTTGTGGC GTCTGGATTT AAAGCAGCCT TAACCCAAGA TCCCGCCTCT
TCTGTTGCTC CTATTACAGG TTTTTTTGCA AATTCGTTTA ATGGCTTACC TAAGGGCGAT
TTAGAAATAG GTTTTGAAGT ATTCTTCTGG GTACATGTAG TATTTTTATC TGGTTTTATG
GTATTTTTTA GATACTCACC GCATGTGCAT CCGGTATTTG CACCCTTAAA TATCTTCTTC
CGTACATTGA AACCAAGGGG CGGGATGATT GAACCCATTA ATTTTGAAGA TGAGAGTATT
GAGCAGTATG GTGTAGCAAA ATTAGAAGAT TTTAATTGGA AACAAATTAT GGATGCTTAT
GCTTGCGCCG AGTGCGGTCG CTGTCAGGCT AACTGTCCGG CTTATCTTAG TGGAAAACAT
CTTTCGCCAA AACATCTTAT TCATAAGCTA AGACTGCATG TAGATGAAAA AGCAAAAATG
CTTGGCTCTG CATTGGGAAA TCATTCATCT GGCTTAGCGG CAGAAGAGAC TGCAGCCAGT
AGCGAAGCAT TAGAACAAAA TTTAGTACCG GATATTTTTA GTGCTGAAGA AATTTGGGAT
TGTACAAACT GTGCCAGTTG CATGGAGCAA TGTCCGGTTT TAAATGAACA TGTGCCTAAA
ATTAATCAAA TGAGACAAAA TCTTGTACTT ATGGAAAGTG ATTTTCCTGC AGAAGCACAA
TTGGCATTTA CTAACATGGA GCGTAACTAT AACCCATGGG GTGTAGGTTG GAACTCCAGA
GGAGAATGGG CTAAAGATCT AGATATTAAA CTGTTAAGTG ATGATAGTAA CGTAGATGTT
GTATACTTTA CTGGTTGCGC AGGTGCCTTT GATGATCGTA GTCAGAAAGT TGCTACCGCC
TTTGTCAAAA TAATGAAAGC AGCAGGTGTG AATTTTGGAA TTCTTGGTCC TGAAGAAAAG
TGTTGTGGTG ATTCTGCCAG ACGTTTAGGA AATGAATACT TAGCTCAAGA ATTAATTAAT
AGTAATATTG AGACTTTAAA CAATTATGGA GTTAAGAAAA TCGTAACGAC CTGCCCTCAC
TGTTTAACTG TATTAAAGGA TGAGTATCCT CAGTTTGGCG GTAATTATGA AGTACTACAC
CACACTCAGT TTATTAATCA GTTAATTCAA GCGGGCAAGT TAAAGTTTAA ACAAGCAGAT
TCAATGAAGA AGATAACATA TCATGATTCT TGCTTCCTGG GACGCTACCA GGATGAGTAT
GAAGCTCCTA GACAAATTAT TAACCGATTG CCAGGTATCA ATCTGGTTGA GATGACAAGA
AACAAAACCA AGGGCTTTTG TTGTGGGGCT GGTGGCGGAC GGATGTGGCT AGAAGAACAT
GGCACTCGAA TCAACGTAAT GCGTACAGAA CAGGCTTTAG AAACAAACGC AGAAATTATA
GCAACTAACT GTCCGTTCTG TCTGACAATG ATTGAAGATG GCGTAAAAGA TAAAGAAGCA
ACTGAAAAAG TCAAAGCCTT TGACCTTGCA GAATTAGTAG AACGAAATTT ACAGTAA
 
Protein sequence
MSPIRFILFI ALIAFGLFNM VKGIQERLNA TYLGKKDDRM DNIGERLKGL LIYALGQRKV 
VQEADGGIMH IMIFFGSSLF GLRILEFILS SLIPGIFIPF ISDNAIFYLL TDILGLIAIV
GILYSGWRRW VQKVERLEPE AFGTPAENLI LAMVSGLTLM IASVFVASGF KAALTQDPAS
SVAPITGFFA NSFNGLPKGD LEIGFEVFFW VHVVFLSGFM VFFRYSPHVH PVFAPLNIFF
RTLKPRGGMI EPINFEDESI EQYGVAKLED FNWKQIMDAY ACAECGRCQA NCPAYLSGKH
LSPKHLIHKL RLHVDEKAKM LGSALGNHSS GLAAEETAAS SEALEQNLVP DIFSAEEIWD
CTNCASCMEQ CPVLNEHVPK INQMRQNLVL MESDFPAEAQ LAFTNMERNY NPWGVGWNSR
GEWAKDLDIK LLSDDSNVDV VYFTGCAGAF DDRSQKVATA FVKIMKAAGV NFGILGPEEK
CCGDSARRLG NEYLAQELIN SNIETLNNYG VKKIVTTCPH CLTVLKDEYP QFGGNYEVLH
HTQFINQLIQ AGKLKFKQAD SMKKITYHDS CFLGRYQDEY EAPRQIINRL PGINLVEMTR
NKTKGFCCGA GGGRMWLEEH GTRINVMRTE QALETNAEII ATNCPFCLTM IEDGVKDKEA
TEKVKAFDLA ELVERNLQ