Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1721 |
Symbol | |
ID | 4956315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1880829 |
End bp | 1881701 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640180896 |
Product | inner-membrane translocator |
Protein accession | YP_001113073 |
Protein GI | 134299577 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.021923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGGAC AGCAGCTACT TAATGGAATA ACATTAGGTG CAACCTATGC GTTAATCGCC CTAGGTTACA CGATGGTTTA CGGTATTATT CAGTTGATTA ACTTTGCCCA TGGAGAAATC TATATGGTTG GTGCTTTTGT AGGGGTGTTA ATGGTTACTG TTTTTCAACA GGGGTTAGCT GCTTCGTTGG TTGCTGCTAT GCTTACCTGT ATGGTTATCG GTGTATCCAT TGAACGCATT GCTTATCGTC CCCTCCGCAG GTCCACTCGG TTAGCTCCGC TAATTTCTGC CATTGGAGTT TCTATTTTTC TACAGACATT AATGACAAAG CTCAAAGGTC CACAACCTGT AGGGTTTCCC CATGTAATTG AAGATGCCAT TTATAAATTT GCTTCAATTG AAATCAGCAA GGTACAGATT ATTATCTTAG TATTATCCAG CCTACTTATG GCAGGACTAC ATTTTATTGT GAAGTATGTT AAGATTGGTA AAGCCATGCG AGCTGCTTCG GAAGATTATG ATACGGCAGC GTTAATGGGT ATAAATGTCA ACAGAGTTAT CTCATTTACC TTTGCTATTG GATCAGCTCT GGCTGCAGCG GGTGGGGTAC TGGTAGGGAT TTATTTTAAC TCTGTATCGC CGCTAATGGG AGTAACGGTA GGTTTAAAGG CCTTCTGTGC TGCTGTCTTA GGGGGGATCG GAAGTATACC AGGGGCCATG TTGGGAGGTT TGTTTTTAGG TGTGGCGGAG ACCCTGGGCG TAGCCGGCGG TTTTGATTTA TATAAAGACG CCATTGCCTT TACCCTGTTA ATTGTAGTTT TACTTTTCCG GCCCACGGGG TTGCTAGGAC GGCCAATTCA AAGGAAAGTG TAG
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Protein sequence | MLGQQLLNGI TLGATYALIA LGYTMVYGII QLINFAHGEI YMVGAFVGVL MVTVFQQGLA ASLVAAMLTC MVIGVSIERI AYRPLRRSTR LAPLISAIGV SIFLQTLMTK LKGPQPVGFP HVIEDAIYKF ASIEISKVQI IILVLSSLLM AGLHFIVKYV KIGKAMRAAS EDYDTAALMG INVNRVISFT FAIGSALAAA GGVLVGIYFN SVSPLMGVTV GLKAFCAAVL GGIGSIPGAM LGGLFLGVAE TLGVAGGFDL YKDAIAFTLL IVVLLFRPTG LLGRPIQRKV
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