| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1684 |
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| Symbol | |
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| ID | 4957080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1838196 |
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| End bp | 1841411 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640180859 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001113036 |
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| Protein GI | 134299540 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000705985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAA AGCAGGGGAT TAAAAAAGTT TTGGTAATAG GTTCTGGCCC CATCGTCATT
GGCCAGGCAG CTGAATTTGA TTATGCGGGA ACTCAAGCCT GCCGTTCATT AAAAGAAGAG
GGACTGGAAG TAATACTGGT TAACTCTAAT CCAGCCACCA TTATGACCGA TGCCAATATG
GCTGATAAAG TATTTATTGA ACCTTTAACA CCGGAGTTTG TCACCCGTGT CATACGGCAA
GAAAAACCGG ACGGTTTATT ACCAACTCTG GGGGGACAGG TTGGCCTAAA CATCGCATTG
CAACTGGCCG AGCAGGGAGT TTTGGATGAA GAGGAAGTTC TTTTACTGGG AACTCCCTTG
GATGCCATCC GTAAGGCTGA AGACAGGGAA ATGTTTAAAC TCATGATGGA ACAAATTGCT
GAACCGGTTC CGGAAAGCAC CATTGTTTGT TCGGTTTGGG AAGCAGTGGA GTTTGCTGAT
GACATTGGAT ATCCGGTCAT TGTGCGTCCA GCCTATACGC TGGGTGGTAC CGGCGGCGGG
ATAGCCAAAA ACCAGGAAGA ACTCAAGGCG GTTGCCATTC GGGGCTTAAA ACATAGTTTA
ATTGGACAGA TTTTAGTTGA ACGCAGTGTG GCTGGTTGGA AAGAAATTGA GTATGAAGTA
ATACGGGACA GTGCTGATAA TTGTATTACA GTTTGTAATA TGGAGAATTT TGATCCAGTG
GGTGTTCACA CCGGTGATAG CATTGTGGTG GCACCCTCTC AGACCCTCAG TGACCGAGAG
TACCAGATGC TTCGCAGTGC ATCATTAAAG ATCATACGTT CCCTTGGCAT AGAAGGTGGT
TGCAATGTGC AGTTTGCATT GGACCCACAT AGTTACCAAT ATTATGTAAT AGAAGTGAAT
CCCCGGGTCT CCCGCTCCTC GGCACTGGCT TCCAAAGCAA CGGGTTATCC CATTGCCAAG
GTGGCCAGTA AAATTGCCAT TGGTTTGACA CTGGACGAAA TTCGTAATTC GGTAACAGGG
AAAACCTATG CTTGTTTTGA ACCCACCCTA GACTATGTGG TGCTAAAGTT TCCCCGCTGG
CCCTTTGACA AATTTACCGA TGCCGACCGT ACCCTAGGTA CACAAATGAA GGCCACTGGT
GAAGTCATGT CCATAGACAG AACCTTTGAG GCTGCCTTAA TGAAGGCCAT CCGTTCGTTG
GAAGTGGGAA TCCACGGTTT GCAATTGCCA GAATTAGCGG GTTTATCAGA ACCAGAGCTG
ATAGCAAAGT TAATAAAGGC CGAAGATCAA CGGCTGTTTG CCATTGTAGA GTATTTTCGA
CGGGGTGGTA GCGTTCAGCG GGTTGCTGAA TTAACTTCCA TTGATGTTTT CTTCCTGGAA
AAGATTTATC ATGCCCTGGC CTTTGAAAAG CAGCTTGCGG CTGAGGGTAA AACAAAACTG
GGTAAAGATA CCTTGTTGAT TGCAAAAAGA ATGGGGTTAT CGGATCAATA CATTGGTTGG
CTGGCGGGAA TGACGGAGGC CCAGGTAAGG GGATTAAGGC AGAGCTTTGG CCTTGAGCCG
GTCTACAAAA TGGTAGACAC CTGTGCTGCT GAGTTTGAGG CCGCAACACC CTATTACTAC
TCTTGTTACG AAACCGAGAA TGAAGCCCAG CCCACCAATA GAAATAAAAT AGTTGTTTTG
GGTTCCGGTC CCATTCGGAT TGGCCAGGGC ATTGAGTTTG ACTATTGTTC GGTTCATTCC
GTGTGGGCCT TAAAAGAAGA GGGCATCGAA GCCATAACAA TTAACAATAA CCCGGAGACG
GTGAGCACAG ATTTTGACAC TTCCGACCGA CTATATTTTG AACCTCTGGT AGCAGAAGAT
GTGATGAACA TTTTGGAAAA AGAAAATCCC CTGGGAGTTA TTGTCCAATT TGGTGGACAG
ACTGCCATCA ATCTGGCAAA ACCTCTGGAA AAAGCAGGTT ATCAAATTTT GGGAACTTCT
GTGGATGCCA TAGATATTGC CGAAGATAGG GAGCGCTTTG ATAAACTGTT GGTAGACTTA
GATATACCAA AACCGCCGGG AAGGACTGCC TATTCCCTGC AAGAGGCAAC CGCCATTGCC
GGGGAAATCG GATTCCCGGT ACTGGTACGA CCCTCCTATG TACTGGGAGG ACGGGCCATG
GAGATTGTCT ATTCCCAAGA AGAACTTCAT GCCTATATGG AAAGGGCTGT AAAGGTAACC
CCGGATCACC CGGTTTTGGT GGATCACTAT ATGGTGGGCA AGGAATTTGA GGTGGATGCC
ATTTCTGATG GCAAAACCGT GTTGATTCCA GGAATTATGG AGCATATAGA ACGGGCAGGC
GTTCATTCCG GTGACAGTAT CTCGGTTTAT CCAGCCCAAA CCCTAACACC TACCCAGATT
GAACAAATGG TAAGTTATAC AGAGCGTTTA GCCCGGGCCT TGGGCGTTAA GGGGTTGGTG
AACATCCAGT ATGTTCTCCA CGAAGGACAG ATCTATGTCA TTGAGGTAAA CCCCCGCTCC
AGCCGTACTG TACCCTACCT AAGCAAAGTA ACGGGTGTTC CCATGGTGAA CCTTGCTACC
AAATGTGCAA TGGGTAAAAC CTTGGCAGAA ATGGGTTATC CAGGAGGTCT GCTGCCGGAA
ACAGGTCTGG TGGCTGTAAA AGCACCTGTG TTCTCCTTTG GCAAACTGTT AAATGTAGAT
GTATCCCTGG GCCCTGAAAT GAAGTCTACC GGCGAGGTGC TGGGGGTGGA TCGTCACTTC
TCGGTGGCCT TATATAAAGC TTTAATGGCC GCAGGAACAA GCTTTCCAAA ACAGGGAACA
GTTCTTGCCA CCATTGCGGA CCGTGATAAA GAAGAATCCC TAGCAGTAAT TCAAGGACTG
GTGGAGTTGG GATATACAGT GTGCGCCACC AAGGGTACGG CGGCATTTCT GCAACAACAT
AGCATTGAGG TTAAAGAGGT CAATAAGGTA GGCGAAGGCG GAGAAACCAT TGTTGATCTA
ATTAAAGCAG GCAGCATCAA CCTGGTAATT AATACCATTA GTCGAGGGAA GGAACCCCAG
AGGGATGGTT TTAAGATCCG AAGATCTGCA GTGGAACATG GTATTCCATG TTTAACCTCC
ATGGACACTG CCTGGGCCAT GTTGGAAGTG CTTTACGGAA TACAGGAAGG TGAAGTGCCA
GATTTAATTC CTCTCCAGAA TTACATGAAC AAATAG
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| Protein sequence | MPKKQGIKKV LVIGSGPIVI GQAAEFDYAG TQACRSLKEE GLEVILVNSN PATIMTDANM
ADKVFIEPLT PEFVTRVIRQ EKPDGLLPTL GGQVGLNIAL QLAEQGVLDE EEVLLLGTPL
DAIRKAEDRE MFKLMMEQIA EPVPESTIVC SVWEAVEFAD DIGYPVIVRP AYTLGGTGGG
IAKNQEELKA VAIRGLKHSL IGQILVERSV AGWKEIEYEV IRDSADNCIT VCNMENFDPV
GVHTGDSIVV APSQTLSDRE YQMLRSASLK IIRSLGIEGG CNVQFALDPH SYQYYVIEVN
PRVSRSSALA SKATGYPIAK VASKIAIGLT LDEIRNSVTG KTYACFEPTL DYVVLKFPRW
PFDKFTDADR TLGTQMKATG EVMSIDRTFE AALMKAIRSL EVGIHGLQLP ELAGLSEPEL
IAKLIKAEDQ RLFAIVEYFR RGGSVQRVAE LTSIDVFFLE KIYHALAFEK QLAAEGKTKL
GKDTLLIAKR MGLSDQYIGW LAGMTEAQVR GLRQSFGLEP VYKMVDTCAA EFEAATPYYY
SCYETENEAQ PTNRNKIVVL GSGPIRIGQG IEFDYCSVHS VWALKEEGIE AITINNNPET
VSTDFDTSDR LYFEPLVAED VMNILEKENP LGVIVQFGGQ TAINLAKPLE KAGYQILGTS
VDAIDIAEDR ERFDKLLVDL DIPKPPGRTA YSLQEATAIA GEIGFPVLVR PSYVLGGRAM
EIVYSQEELH AYMERAVKVT PDHPVLVDHY MVGKEFEVDA ISDGKTVLIP GIMEHIERAG
VHSGDSISVY PAQTLTPTQI EQMVSYTERL ARALGVKGLV NIQYVLHEGQ IYVIEVNPRS
SRTVPYLSKV TGVPMVNLAT KCAMGKTLAE MGYPGGLLPE TGLVAVKAPV FSFGKLLNVD
VSLGPEMKST GEVLGVDRHF SVALYKALMA AGTSFPKQGT VLATIADRDK EESLAVIQGL
VELGYTVCAT KGTAAFLQQH SIEVKEVNKV GEGGETIVDL IKAGSINLVI NTISRGKEPQ
RDGFKIRRSA VEHGIPCLTS MDTAWAMLEV LYGIQEGEVP DLIPLQNYMN K
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