| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1673 |
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| Symbol | |
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| ID | 4957946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1828578 |
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| End bp | 1829498 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180849 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001113026 |
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| Protein GI | 134299530 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.529944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATCAT ATACCTATAT CGTAGATGGG GAAAATGCAA AATGCAGGTT AGATGTCTTT
CTGGCCAATC AATGTCAGGA TATAAGCCGG TCCTATATAC AAAAATTAAT TGAAGATGGT
TTGGTTACGG TGGATGGGAA ACCAGCCAGA GCCAACCATA AATTGCGGGT AGAAGAAACC
ATCCATATGC AAATCCCTCC TGCCGAAGAA TTAAAGGTTG AACCGGAAAA CATCCCACTG
GATATTTATT ATGAGGATAG CCATGTGATT GTGGTGAACA AGCCCCGGGG CATGGTTGTT
CATCCAGCAG AGGGAAATAT CGCCGGAACA TTGGTGAACG CCCTTTTATA CCATTGTCAC
GATTTGTCCG GCATTAATGG GATCATGCGA CCGGGTATCG TCCACCGCTT AGATAAGGAT
ACTTCCGGGT TAATTATGGC GGCAAAACAT GATCAGGCCC ATCAAAGCCT GGCCCGGCAG
TTAAAGGATA GAACTGTTAC GAGGCGTTAT CAGGCTTTGG TTCACCATAA CATTAAAGGG
GATTTTGGCA CTATCAATGC ACCCATAGGA CGTGACCCTA GAGATAGACA AAAAATGGCT
GTGGTTGAAC GAAATTCTAA GAATGCAGTA ACCCATTTTC AGGTCTTAGA ACGATTTGGA
GACTATACAT TAATAGAATG TCGATTAGAG ACAGGCAGGA CACACCAAAT AAGGGTTCAC
ATGGCCTATA TTGGATTTCC TCTGGTGGGA GATCCCAAAT ATGGACCTTC TAAATCACAC
TTTCATTTGG ATGGACAACT GCTTCATGCG AAGGTGCTTG GTTTTCTGCA CCCGGTTTCT
GGAGAATATC TAGAATTTAT AGCTCCTTTA CCAGATGTTT TTGAGAATGT ACTAGTCAAA
CTACGAGGTG CAAAAAATTA A
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| Protein sequence | MESYTYIVDG ENAKCRLDVF LANQCQDISR SYIQKLIEDG LVTVDGKPAR ANHKLRVEET
IHMQIPPAEE LKVEPENIPL DIYYEDSHVI VVNKPRGMVV HPAEGNIAGT LVNALLYHCH
DLSGINGIMR PGIVHRLDKD TSGLIMAAKH DQAHQSLARQ LKDRTVTRRY QALVHHNIKG
DFGTINAPIG RDPRDRQKMA VVERNSKNAV THFQVLERFG DYTLIECRLE TGRTHQIRVH
MAYIGFPLVG DPKYGPSKSH FHLDGQLLHA KVLGFLHPVS GEYLEFIAPL PDVFENVLVK
LRGAKN
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