Gene Dred_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1655 
Symbol 
ID4957074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1812550 
End bp1814433 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content45% 
IMG OID640180831 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001113008 
Protein GI134299512 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG3411] Ferredoxin
[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATAA AAAGTCATGA TGATCTAAAA CAACTTAGAC AGAAGGTAAA GGCTGCCCTT 
GATCAAGAAA AGATGCGCAT CTTAGTCTGT GCTGGTACAG GATGTGTGGC CAACGGCTCT
TTAAAGGTAT ACGCAGCATT AAAAAGAATG ATTGAAGAAA AGGGACTTCT AACCAGTGTT
GAGCTAGTAG AAGAAGTAAG TCACGAAGGG ATAGCTGTAA ACATAAGTGG TTGTCACGGT
TTTTGTCAGA TGGGACCTCT GGTTCGTTTT GAACCATCTG GACTACTTTA CTGCAAGGTA
AAAGAAGAAG ATGCGGAAGA AATCGTTAAT ACAACCGTTC TAAATAACGG TATTGTGGAA
CGTTTATTAT ATGAGGATCC TAATACCGGT GAAAAAATTA AAACACAGGA TGAAAACCCT
TTCTATAAAC GCCAAGAACG CGTGACTTTA CGTTATTGTG GCCGTATTGA TCCCGATGAT
ATCTATGATT ATATTGCGCA CCGCGGCTAT CGGGCCATCA GCAAGATACT ACAGGAAATG
AACCCAGAAG AAGTTATTAA GGAAGTTAAC GATTCCGGTT TAAGGGGTCG GGGCGGCGGT
GGATTCCCCA CTGGTCGCAA ATGGTCCTTT GCTGCTTCGC AACCTGGACC CAAGAAATAT
ATCATTTGTA ACGGAGATGA GGGTGATCCG GGCGCCTTCA TGGATCGTTC TGTAATGGAG
GGCAACCCAC ACTCCGTATT AGAGGGCATG ATGATTGCTG GATACGCCAT AGGGGCTAAT
GAGGGTTATA TCTATGCTAG AGCCGAATAT CCCCTGGCAA TTAAACGCAT GCGTAAGGCT
ATTGCAGACG CCGAAGCACA TGGATTATTG GGCAACAATA TTTTAGGCAG TGATTTTAAT
TTCAAAATTA ATATCAAAGA AGGTGCCGGA GCCTTTGTAT GCGGTGAGGA AACTGCTCTT
ATCGCCTCCA TTGAAGGTGA ACGCGGTATG CCTCGTCCAC GTCCTCCCTT CCCGGCTGTT
AAAGGTTTAT GGGGATGTCC CACCATTATT AACAACGTAG AAACCTTGGC AAACCTACGC
TACATTATCA ACAATGGAGC TGGCGAGTTC AAAAAATATG GTACTGCCGG CAGCTCTGGA
ACCAAAACCT TTGCCCTGGC TGGTCAGGTG CAAAATACGG GTCTAGTAGA AGTGCCCATG
GGCGTTACCC TGCGTGAAGT GGTATTTGAC ATTGGTGGTG GTCTCAGGGA TGGAAAAAAA
TATAAATCTG TTCAAATTGG TGGCCCCTCC GGTGGTTGTC TAACAGAAGA TAAATTAGAT
TTGCCCCTAG ATTATGATGA ATTAATGAAA GTGGGCGCCA TGATTGGTTC CGGTGGCTTG
GTTGTTATGG GTGATGACAC CTGCATGGTC GAAACCGCCA AGTTCTTTAT GGGCTTCGTG
CAAAACGAAT CCTGCGGCAA ATGTGTCCCC TGCCGCGAGG GAACCAAACA ATTACTGGCC
CTTTTAACCA AGATAACTGA GGGAAAAGGA ACTGAAGCAG ATCTTGATCT TTTGGAAGAA
TTGGCACAAA ACGTTAAGGA CGGGTCTTTA TGCGGACTAG GAAAAACTGC ACCGAACCCG
GTTCTGACCA CTCTCCGTTA CTTCCGTGAC GAATATATTG CGCACGTACG TGACAAAAAA
TGTCCTGCAG GTGCCTGTCA AGCCTTAAAG GAATACTACA TTAATCCTGA AAAATGCAAG
GGTTGTACTG TATGTTCCAG AGTATGTCCC GCCGGTGCCA TCACCGGAGA AAAGAAGCAA
CCCCATGTCA TTAATGTAGA TCTCTGCTTG AAGTGCGGTG CTTGTATGGA AAAATGTAAG
TTTGGCTCTA TAGAGATCAG GTAG
 
Protein sequence
MLIKSHDDLK QLRQKVKAAL DQEKMRILVC AGTGCVANGS LKVYAALKRM IEEKGLLTSV 
ELVEEVSHEG IAVNISGCHG FCQMGPLVRF EPSGLLYCKV KEEDAEEIVN TTVLNNGIVE
RLLYEDPNTG EKIKTQDENP FYKRQERVTL RYCGRIDPDD IYDYIAHRGY RAISKILQEM
NPEEVIKEVN DSGLRGRGGG GFPTGRKWSF AASQPGPKKY IICNGDEGDP GAFMDRSVME
GNPHSVLEGM MIAGYAIGAN EGYIYARAEY PLAIKRMRKA IADAEAHGLL GNNILGSDFN
FKINIKEGAG AFVCGEETAL IASIEGERGM PRPRPPFPAV KGLWGCPTII NNVETLANLR
YIINNGAGEF KKYGTAGSSG TKTFALAGQV QNTGLVEVPM GVTLREVVFD IGGGLRDGKK
YKSVQIGGPS GGCLTEDKLD LPLDYDELMK VGAMIGSGGL VVMGDDTCMV ETAKFFMGFV
QNESCGKCVP CREGTKQLLA LLTKITEGKG TEADLDLLEE LAQNVKDGSL CGLGKTAPNP
VLTTLRYFRD EYIAHVRDKK CPAGACQALK EYYINPEKCK GCTVCSRVCP AGAITGEKKQ
PHVINVDLCL KCGACMEKCK FGSIEIR