Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1655 |
Symbol | |
ID | 4957074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1812550 |
End bp | 1814433 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640180831 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001113008 |
Protein GI | 134299512 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG3411] Ferredoxin [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAATAA AAAGTCATGA TGATCTAAAA CAACTTAGAC AGAAGGTAAA GGCTGCCCTT GATCAAGAAA AGATGCGCAT CTTAGTCTGT GCTGGTACAG GATGTGTGGC CAACGGCTCT TTAAAGGTAT ACGCAGCATT AAAAAGAATG ATTGAAGAAA AGGGACTTCT AACCAGTGTT GAGCTAGTAG AAGAAGTAAG TCACGAAGGG ATAGCTGTAA ACATAAGTGG TTGTCACGGT TTTTGTCAGA TGGGACCTCT GGTTCGTTTT GAACCATCTG GACTACTTTA CTGCAAGGTA AAAGAAGAAG ATGCGGAAGA AATCGTTAAT ACAACCGTTC TAAATAACGG TATTGTGGAA CGTTTATTAT ATGAGGATCC TAATACCGGT GAAAAAATTA AAACACAGGA TGAAAACCCT TTCTATAAAC GCCAAGAACG CGTGACTTTA CGTTATTGTG GCCGTATTGA TCCCGATGAT ATCTATGATT ATATTGCGCA CCGCGGCTAT CGGGCCATCA GCAAGATACT ACAGGAAATG AACCCAGAAG AAGTTATTAA GGAAGTTAAC GATTCCGGTT TAAGGGGTCG GGGCGGCGGT GGATTCCCCA CTGGTCGCAA ATGGTCCTTT GCTGCTTCGC AACCTGGACC CAAGAAATAT ATCATTTGTA ACGGAGATGA GGGTGATCCG GGCGCCTTCA TGGATCGTTC TGTAATGGAG GGCAACCCAC ACTCCGTATT AGAGGGCATG ATGATTGCTG GATACGCCAT AGGGGCTAAT GAGGGTTATA TCTATGCTAG AGCCGAATAT CCCCTGGCAA TTAAACGCAT GCGTAAGGCT ATTGCAGACG CCGAAGCACA TGGATTATTG GGCAACAATA TTTTAGGCAG TGATTTTAAT TTCAAAATTA ATATCAAAGA AGGTGCCGGA GCCTTTGTAT GCGGTGAGGA AACTGCTCTT ATCGCCTCCA TTGAAGGTGA ACGCGGTATG CCTCGTCCAC GTCCTCCCTT CCCGGCTGTT AAAGGTTTAT GGGGATGTCC CACCATTATT AACAACGTAG AAACCTTGGC AAACCTACGC TACATTATCA ACAATGGAGC TGGCGAGTTC AAAAAATATG GTACTGCCGG CAGCTCTGGA ACCAAAACCT TTGCCCTGGC TGGTCAGGTG CAAAATACGG GTCTAGTAGA AGTGCCCATG GGCGTTACCC TGCGTGAAGT GGTATTTGAC ATTGGTGGTG GTCTCAGGGA TGGAAAAAAA TATAAATCTG TTCAAATTGG TGGCCCCTCC GGTGGTTGTC TAACAGAAGA TAAATTAGAT TTGCCCCTAG ATTATGATGA ATTAATGAAA GTGGGCGCCA TGATTGGTTC CGGTGGCTTG GTTGTTATGG GTGATGACAC CTGCATGGTC GAAACCGCCA AGTTCTTTAT GGGCTTCGTG CAAAACGAAT CCTGCGGCAA ATGTGTCCCC TGCCGCGAGG GAACCAAACA ATTACTGGCC CTTTTAACCA AGATAACTGA GGGAAAAGGA ACTGAAGCAG ATCTTGATCT TTTGGAAGAA TTGGCACAAA ACGTTAAGGA CGGGTCTTTA TGCGGACTAG GAAAAACTGC ACCGAACCCG GTTCTGACCA CTCTCCGTTA CTTCCGTGAC GAATATATTG CGCACGTACG TGACAAAAAA TGTCCTGCAG GTGCCTGTCA AGCCTTAAAG GAATACTACA TTAATCCTGA AAAATGCAAG GGTTGTACTG TATGTTCCAG AGTATGTCCC GCCGGTGCCA TCACCGGAGA AAAGAAGCAA CCCCATGTCA TTAATGTAGA TCTCTGCTTG AAGTGCGGTG CTTGTATGGA AAAATGTAAG TTTGGCTCTA TAGAGATCAG GTAG
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Protein sequence | MLIKSHDDLK QLRQKVKAAL DQEKMRILVC AGTGCVANGS LKVYAALKRM IEEKGLLTSV ELVEEVSHEG IAVNISGCHG FCQMGPLVRF EPSGLLYCKV KEEDAEEIVN TTVLNNGIVE RLLYEDPNTG EKIKTQDENP FYKRQERVTL RYCGRIDPDD IYDYIAHRGY RAISKILQEM NPEEVIKEVN DSGLRGRGGG GFPTGRKWSF AASQPGPKKY IICNGDEGDP GAFMDRSVME GNPHSVLEGM MIAGYAIGAN EGYIYARAEY PLAIKRMRKA IADAEAHGLL GNNILGSDFN FKINIKEGAG AFVCGEETAL IASIEGERGM PRPRPPFPAV KGLWGCPTII NNVETLANLR YIINNGAGEF KKYGTAGSSG TKTFALAGQV QNTGLVEVPM GVTLREVVFD IGGGLRDGKK YKSVQIGGPS GGCLTEDKLD LPLDYDELMK VGAMIGSGGL VVMGDDTCMV ETAKFFMGFV QNESCGKCVP CREGTKQLLA LLTKITEGKG TEADLDLLEE LAQNVKDGSL CGLGKTAPNP VLTTLRYFRD EYIAHVRDKK CPAGACQALK EYYINPEKCK GCTVCSRVCP AGAITGEKKQ PHVINVDLCL KCGACMEKCK FGSIEIR
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