Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1647 |
Symbol | |
ID | 4955256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1801389 |
End bp | 1802612 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180823 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001113000 |
Protein GI | 134299504 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00531566 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATT TTCAAAAACA ACTTGAGATT ATTAGACGGG GCGTGGCAGA GATTGTTCCT GAAGAGGAAC TGGTAGAGAA GTTAAAAAAG TCTGTTGCCA GTAATAAACC TTTACATATT AAGCTGGGAC TAGACCCCTC GGCCCCAGAT ATTCACCTGG GTCATACTGT TGTGTTGCAA AAATTGCGTC AGTTTCAGGA ACTGGGCCAC AACATTACTA TTATTCTGGG TGATTTTACA GGTCGAATTG GCGATCCCAC TGGCAAATCC GTAGCAAGAA AACCATTAAC GGAAGAAGAA GTACTGGCCA ATGCCAGGAC CTATGAACAA CAAATCTTTA AAATTTTAGA TCCAGAAAAA ACCAAAGTAC ACTTTAATAG TACATGGCTT GCTCCCTTAA AATTTGAAGA TGTTATAAAA TTAGCTGCAA CTACTACGGT CGCCAGAATG TTGGAACGCG AGGACTTTAC AAAACGCATG AGGGAAAATT TACCCATCAG CATTCATGAG TTTTTCTATC CTTTAATGCA AGGCTATGAT TCTGTTGCCC TGGAAGCAGA TATAGAAATG GGAGGGACGG ATCAAAAATT CAACTTGTTA ATGGGACGAA CTTTGCAAAA GGAATTTGGC CAAGAACCAC AGGTTGCAAT CATGATGCCA ATTCTTGAGG GCCTTGATGG TGTAAATAAA ATGAGTAAGA GTCTAGGTAA CTATATCGGT ATTGATGAAC CACCACAAGA AATGTACGGA AAAACAATGT CTCTTCCAGA TGAGTTAATG GTGCGCTATT TTGAGTTGGT TACACCAGTG CCTTTAGAAG AAGTTAAAGC AATTGCCAAG GGGTTGGAGG ATGGTTCGCT GCATCCCAGG GATGTGAAGA TGAGATTGGG CAGAGAAATT GTGACATTCT ACCATGGACC CGAGGCGGCC CTGCAAGCAG AAGATCATTT TAAAACGGTC TTTCAAAAGG GGGAAATCCC TGATGAAATA GATGAGTTTT TAGTCTCGGG GGATTTACTT GAAGAAGGTT TAGTAGCGTT ACCCAAGCTT CTAACCCAGG CTAAGCTAGC TGGTACCAAT AGCGAAGCAA GGAGGCTTAT AAAAGAAGGG GCAGTAAAAA TTAACGGAGA GAAAGCAACT GATCCCAATA TGAGATTGAA ACCACAAGAA GGTATGATTA TTCGGACGGG TAAACGTAAA TTTGCTAAAC TGATATTGAA ATAA
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Protein sequence | MLDFQKQLEI IRRGVAEIVP EEELVEKLKK SVASNKPLHI KLGLDPSAPD IHLGHTVVLQ KLRQFQELGH NITIILGDFT GRIGDPTGKS VARKPLTEEE VLANARTYEQ QIFKILDPEK TKVHFNSTWL APLKFEDVIK LAATTTVARM LEREDFTKRM RENLPISIHE FFYPLMQGYD SVALEADIEM GGTDQKFNLL MGRTLQKEFG QEPQVAIMMP ILEGLDGVNK MSKSLGNYIG IDEPPQEMYG KTMSLPDELM VRYFELVTPV PLEEVKAIAK GLEDGSLHPR DVKMRLGREI VTFYHGPEAA LQAEDHFKTV FQKGEIPDEI DEFLVSGDLL EEGLVALPKL LTQAKLAGTN SEARRLIKEG AVKINGEKAT DPNMRLKPQE GMIIRTGKRK FAKLILK
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