Gene Dred_1612 details

Gene Information

• Locus tag: Dred_1612
• Symbol: thrS
• ID: 4958359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1752538
• End bp: 1754445
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640180788
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001112965
• Protein GI: 134299469
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000178172
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAAA TAACCCTGAA AGATGGTTCT GTTAGAGAAT ATGCAGTTGG AACCACTGTG 
TTAGAAGTTG CTAAGAGCAT CAGTCAAGGC TTAGCCAGGG AAGCTTTGGC TGGTAAAGTT 
AATGGTAAGA TTGTGGATCT TGAGTATCCC TTAAAGGAAG ATGCTGCGTT AGAATTATTG 
ACCTTTAATG ATGAAGAGGG AAAAACCGTT TATCGCCACA GTACAGCCCA CGTTTTAGCT 
CAGGCTGTAA AAAGATTGTT CCCAGATGCT AAACTAGCCA TTGGTCCTGC CATTCAAGAT 
GGTTATTATT ACGATTTTGA TGTTGAACAA CCCTTTACAC CTGCGCAATT AGAACGTATT 
GAAGAAGAAA TGAATAAAAT TATTAAGGAA GATATTCCTT TCAAACGGGT GGAACTCTCG 
CGGGAAGAAG CCTTGGAACA CTTCAAAAAA CAGGACGAAA TCTATAAGAT AGAACTTATC 
ACAGATCTGC CCGAGGACGC AGTTATCTCC TGTTACCAAC AGGGGGATTT TGATGATCTC 
TGTGCTGGGC CCCACGTACC TTCCACTGGA CGCTTAAAGA GTCTTAAGCT GATGAGCATT 
GCCGGTGCTT ATTGGCGGGG CAGCGAGAAA AACAAAATGC TGCAGCGTAT TTATGGCACA 
TCTTTTCCCA AAAAGGCCAT GCTGGATGAA CATCTCTTCC GCATTGAGGA AGCCAAGCGC 
CGTGACCATA GGAAATTGGG GCAGGAATTG GATCTCTTTA GTATTCAGGA AGAGGGACCG 
GGATTTCCTT TCTTCCATCC CAAGGGCATG GTTTTACGCA ATGAATTGGA AAATTTCTGG 
CGTCAAGAAC ATAAAAAACG TGGTTACCAG GAAATTCGCA CACCCATTAT CTTAAATCGC 
AGCATGTGGG AGCAATCCGG CCACTGGGCC CATTATAAGG ATAATATGTA CTTTACCAAA 
ATTGATGAAG CAGATTATGC CGTAAAGCCC ATGAACTGTC CAGGCAGTAT TTTGGTTTAC 
AAAACTAGAA TGCACAGCTA TCGCGATCTG CCTTTGCGCT GGGGTGAACT GGGCCTTGTA 
CACCGCCACG AGTTGTCTGG CGCTTTGCAC GGCTTAATGC GTGTGCGTTG CTTTACCCAA 
GATGATGCAC ATATCTTCAT GCTGCCCAGT CAGATTAAGG ACGAGATTAT TGGTGTTATT 
GATCTGTTTG ATTACTTCTA TAATACCTTT GGTTTAAATT ACCACGTAGA ACTCTCCACC 
CGTCCGGAGA AATCCATGGG TTCCGATGAA ATGTGGGAAG TTGCAACCAA CTCCCTCCGC 
GATGCTCTGG AGGCCAAAAA GATGGATTAT AAAGTCAACG AGGGCGACGG AGCTTTCTAT 
GGACCTAAAA TTGACTTCCA CTTAACTGAT AGTTTGGGTA GAACTTGGCA GTGTGGTACC 
ATTCAATTAG ACTTCCAAAT GCCGGAAAGA TTCAATCTGA ACTATGTTGG GGAAGACGGT 
CAGAAGCACC GTCCTGTTAT GATCCACAGA GTTGTTTTTG GCAGTATTGA ACGATTTATT 
GGTATTCTAA CAGAGCACTT TGCTGGAGCC TTCCCGGTTT GGTTGGCACC TGTACAGGTG 
AAAGTGCTGC CCATTACCGA TAGGCATCAT GAATATGCCC GGGAATTAGT AAAGAGATTG 
CAAGGGCTGG ATATTCGAGT GGAACTGGAT GCCAGAAATG AAAAAATCAA CTATAAAATC 
CGGGAAGCCC AGACCCAGAA AATTCCTTAC ATGCTGGTGA TTGGTGATCG AGAAATGGAA 
CAAGGAGCCG TTGCAGTACG TGAGCGTGGC AAAGGCGATG TTGGCGCCAT TTCGGTGGGA 
GATTTTATCA AGAAAATAGA AGATGATATT CAAAACAAAA CGATATAA 

 

Protein sequence

MIKITLKDGS VREYAVGTTV LEVAKSISQG LAREALAGKV NGKIVDLEYP LKEDAALELL 
TFNDEEGKTV YRHSTAHVLA QAVKRLFPDA KLAIGPAIQD GYYYDFDVEQ PFTPAQLERI 
EEEMNKIIKE DIPFKRVELS REEALEHFKK QDEIYKIELI TDLPEDAVIS CYQQGDFDDL 
CAGPHVPSTG RLKSLKLMSI AGAYWRGSEK NKMLQRIYGT SFPKKAMLDE HLFRIEEAKR 
RDHRKLGQEL DLFSIQEEGP GFPFFHPKGM VLRNELENFW RQEHKKRGYQ EIRTPIILNR 
SMWEQSGHWA HYKDNMYFTK IDEADYAVKP MNCPGSILVY KTRMHSYRDL PLRWGELGLV 
HRHELSGALH GLMRVRCFTQ DDAHIFMLPS QIKDEIIGVI DLFDYFYNTF GLNYHVELST 
RPEKSMGSDE MWEVATNSLR DALEAKKMDY KVNEGDGAFY GPKIDFHLTD SLGRTWQCGT 
IQLDFQMPER FNLNYVGEDG QKHRPVMIHR VVFGSIERFI GILTEHFAGA FPVWLAPVQV 
KVLPITDRHH EYARELVKRL QGLDIRVELD ARNEKINYKI REAQTQKIPY MLVIGDREME 
QGAVAVRERG KGDVGAISVG DFIKKIEDDI QNKTI