Gene Dred_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1608 
Symbol 
ID4957228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1747963 
End bp1749333 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content45% 
IMG OID640180784 
Productamino acid carrier protein 
Protein accessionYP_001112961 
Protein GI134299465 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00276602 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT TAAAAGTTCT TGATCAGGTG GATAGTTTCG TTTGGGGTCC ACCGCTATTA 
ATCTTATTAG TGGGCACAGG AATCTGGCTA ACCCTGAAAC TTCAATTGAT TCAGTTAACT
CGTTTACCAA TGGCCCTAAA GCTTATCTTT AAGGCGAAAA ACGATGGTTC TGGAGATGTC
AGTAGTATTG GTGCCCTATG CACTGCACTG GCAGCCACCG TTGGTACTGG AAATATCGTT
GGGGTGGCAA CTGCTGTCGG GACCGGTGGA CCCGGGGCCA TCTTTTGGAT GTGGATGGCG
GCCTTCTTTG GTATGGCTAC AAAATATGCC GAAGGTCTAT TGGCGGTTAA ATACCGGACC
GTGGACAAAA ATGGACAAAT CTCCGGTGGT CCAATGTACT ATATTGAAAA GGGGTTAGGA
CGTAAATTTC GCCCCCTGGC AATAATGTTT GCAGCCAGTG GCATCCTGGT AGCGTTTTTT
GGTATTGGTA CCTTCCCCCA GGTAAATGCC ATTGTTGATG CTTGTAAACT ATCTCTGGGT
ATCCCGCCTT ATGCAACGGC GGCGGTGGTT ACTGTTCTTG TGGCCTTGGT TACCATTGGT
GGTTTGAAGA GCATTGCCAA TGTTGCAACC AAAGTGGTAC CCTTTATGGC TATATTTTAC
ATATTAAGTT GTGCTTACGT TTTGATAACC TTTGCAGATA AGCTGCCTGC GGTCGTAAAT
CTTATTCTTA CCAGTGCCTT CTCTGGAACA GCTGCGGCAG GTGGTTTTCT AGGTGCCACT
GTTATGCTGG CAATTCGTAA TGGTGTGGCT AGGGGCGTAT TCTCAAATGA ATCCGGTTTG
GGGAGTGCTC CCATTGCAGC AGCTGCGGCG AAAACAAAAT GGCCCGCAGA ACAGGGGTTA
ATATCTATGA CAGGTACCTT TATTGATACC ATTATAATCT GTACCATGAC AGGATTATCT
TTGGTGGTTA CTGGTGTTTG GACAGGTGAA GCTAAGGGTG CGGCCATGAC AAATGAGGCC
TTTGTTTCGG CACTTCCTGG CATAGGTCCG GTAGTTCTGA CCCTTGGCCT GGTTTTGTTT
GCCTTTACCA CTATTCTAGG ATGGAACTAT TACGGTGAAC GCTGTTGTGA ATATCTCTTT
GGAATAAAAG GTATTAAAGC TTATCGATTG ATATTCATTG GGCTGGTTGC CACGGGAGCT
TTCCTAAAGT TGGAAGCTAT ATGGCTGCTG GCAGATATTG TAAACGGCTT AATGGCCATA
CCTAACTTGA TTGCCTTATT GGGCTTAACC GGCGTAATAG TTTCTGAAAC CAAACGATAC
CTTGATTATG TAAAAATTCA AGACGCTAAG GATCATACCA AAGCAGCTTA A
 
Protein sequence
MDFLKVLDQV DSFVWGPPLL ILLVGTGIWL TLKLQLIQLT RLPMALKLIF KAKNDGSGDV 
SSIGALCTAL AATVGTGNIV GVATAVGTGG PGAIFWMWMA AFFGMATKYA EGLLAVKYRT
VDKNGQISGG PMYYIEKGLG RKFRPLAIMF AASGILVAFF GIGTFPQVNA IVDACKLSLG
IPPYATAAVV TVLVALVTIG GLKSIANVAT KVVPFMAIFY ILSCAYVLIT FADKLPAVVN
LILTSAFSGT AAAGGFLGAT VMLAIRNGVA RGVFSNESGL GSAPIAAAAA KTKWPAEQGL
ISMTGTFIDT IIICTMTGLS LVVTGVWTGE AKGAAMTNEA FVSALPGIGP VVLTLGLVLF
AFTTILGWNY YGERCCEYLF GIKGIKAYRL IFIGLVATGA FLKLEAIWLL ADIVNGLMAI
PNLIALLGLT GVIVSETKRY LDYVKIQDAK DHTKAA